RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 RPL11P62913 178 aaKnown RBP7.16□□□□□ -1.26
HIF3A-219ENST00000600879 HBG1P69891 147 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 HBG2P69892 147 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 DLK1P80370 383 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 NHLH2Q02577 135 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 AKR1C1Q04828 323 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 BAXQ07812 192 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 SLC38A11Q08AI6 406 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 FAM90A2PQ658T7 463 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 ACOT7LQ6ZUV0 252 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 ZNF546Q86UE3 836 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 LILRB2Q8N423 598 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 INO80EQ8NBZ0 244 aaPredicted RBP7.16□□□□□ -1.26
HIF3A-219ENST00000600879 OR1S2Q8NGQ3 325 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 TXN2Q99757 166 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
HIF3A-219ENST00000600879 HSPB11Q9Y547 144 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 CDK2AP2O75956 126 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 APOHP02749 345 aaPredicted RBP7.15□□□□□ -1.26
HIF3A-219ENST00000600879 CTSGP08311 255 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 S100A11P31949 105 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 PAFAH1B2P68402 229 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 TNP2Q05952 138 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 CD300CQ08708 224 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 GAMTQ14353 236 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 ATP6V1FQ16864 119 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 SOHLH1Q5JUK2 328 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 Q6ZR54 194 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 Q8N1X5 172 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 OR4X1Q8NH49 305 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 ST8SIA2Q92186 375 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 NPIPB3Q92617 1050 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 AQP10Q96PS8 301 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 ATP6V0BQ99437 205 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 TMEM147Q9BVK8 224 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 RABAC1Q9UI14 185 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 TNFSF18Q9UNG2 199 aa7.15□□□□□ -1.26
HIF3A-219ENST00000600879 TRAV30A0A087WSZ9 112 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 RNF222A6NCQ9 220 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF705EA8MWA4 302 aaPredicted RBP7.14□□□□□ -1.27
HIF3A-219ENST00000600879 ARPC5O15511 151 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 PFDN1O60925 122 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 CLN5O75503 358 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 SCGB2A1O75556 95 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 DFFBO76075 338 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 C1QBP02746 253 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 APOBP04114 4563 aaKnown RBP7.14□□□□□ -1.27
HIF3A-219ENST00000600879 AP2S1P53680 142 aaPredicted RBP7.14□□□□□ -1.27
HIF3A-219ENST00000600879 RELQ04864 619 aaPredicted RBP7.14□□□□□ -1.27
HIF3A-219ENST00000600879 CLINT1Q14677 625 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 C1orf134Q5TEV5 83 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 TRPT1Q86TN4 253 aaKnown RBP7.14□□□□□ -1.27
HIF3A-219ENST00000600879 OR11H4Q8NGC9 324 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 OR5C1Q8NGR4 320 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 GGACTQ9BVM4 153 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 SMIM3Q9BZL3 60 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 NPVFQ9HCQ7 196 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 UQCC1Q9NVA1 299 aa7.14□□□□□ -1.27
HIF3A-219ENST00000600879 ZFP92A6NM28 416 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 HMSDA8MTL9 139 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 FNDC10F2Z333 226 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 OR10J1P30954 320 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 TIGITQ495A1 244 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 ZFP69Q49AA0 526 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 TMEM144Q7Z5S9 345 aa7.13□□□□□ -1.27
HIF3A-219ENST00000600879 UBE2L5PA0A1B0GUS4 154 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF688P0C7X2 276 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 IGLC1P0CG04 106 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 EIF2B2P49770 351 aaKnown RBP7.12□□□□□ -1.27
HIF3A-219ENST00000600879 EMP1P54849 157 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 OR2F1Q13607 317 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 VWC2Q2TAL6 325 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 MORN3Q6PF18 240 aaPredicted RBP7.12□□□□□ -1.27
HIF3A-219ENST00000600879 TEPPQ6URK8 271 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 THAP8Q8NA92 274 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 STXBP6Q8NFX7 210 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 HYLS1Q96M11 299 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 ATP5SQ99766 215 aa7.12□□□□□ -1.27
HIF3A-219ENST00000600879 IGKV1OR2-108A0A075B7D4 117 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 A0A0D9SG52 128 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 IFNA5P01569 189 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 FABP1P07148 127 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 SPP1P10451 314 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 HTN3P15516 51 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 CXCL2P19875 107 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 FGF7P21781 194 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF345Q14585 488 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 TOMM20LQ6UXN7 152 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF600Q6ZNG1 722 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 CSNK1G2-AS1Q8NCQ2 148 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 TRGV9Q99603 122 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 GINS3Q9BRX5 216 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 WFDC1Q9HC57 220 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 WDR83OSQ9Y284 106 aa7.11□□□□□ -1.27
HIF3A-219ENST00000600879 AGRNO00468 2067 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 IGKV1D-37A0A075B6S9 117 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms