RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 RITA1Q96K30 269 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 FAM167A-AS1Q96KT0 104 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 C2orf16Q68DN1 1984 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 DPM2O94777 84 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 DUSP14O95147 198 aaKnown RBP7.88□□□□□ -1.15
NFKB1-212ENST00000600343 NDUFA7O95182 113 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 ERVK-16P61578 105 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 MLST8Q9BVC4 326 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 ZMAT4Q9H898 229 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 COL5A1P20908 1838 aaPredicted RBP7.88□□□□□ -1.15
NFKB1-212ENST00000600343 FCGR3BO75015 233 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 HERVK_113P63121 156 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 TWIST1Q15672 202 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 ZNF441Q8N8Z8 693 aa7.88□□□□□ -1.15
NFKB1-212ENST00000600343 OR2H1Q9GZK4 316 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 TMEM160Q9NX00 188 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 IGKV3D-11A0A0A0MRZ8 115 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 TRAV8-4A0A0B4J246 113 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 H0Y8X5 98 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 KIR2DL1P43626 348 aaPredicted RBP7.87□□□□□ -1.15
NFKB1-212ENST00000600343 UBE2D3P61077 147 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 UBE2D2P62837 147 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 FOXC2Q99958 501 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 CALYQ9NYX4 217 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 TRAV3A0A0B4J244 114 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 HSPE1P61604 102 aaKnown RBP7.87□□□□□ -1.15
NFKB1-212ENST00000600343 FOXC1Q12948 553 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 C17orf99Q6UX52 265 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 PDPNQ86YL7 162 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 FAM57AQ8TBR7 257 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 TRAV2A0A0B4J234 112 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 A0A1B0GX51 115 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 NCBP2LA6PVI3 153 aaKnown RBP7.87□□□□□ -1.15
NFKB1-212ENST00000600343 OR2H2O95918 312 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 NPYP01303 97 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 IGLC6P0CF74 106 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 ODF3Q96PU9 254 aa7.87□□□□□ -1.15
NFKB1-212ENST00000600343 ABCA7Q8IZY2 2146 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 SLC25A53Q5H9E4 307 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 ORMDL3Q8N138 153 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 IGKV1OR2-108A0A075B7D4 117 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 TRGV8A0A0C4DH27 118 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 PGPA6NDG6 321 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 SLC25A20O43772 301 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 TMEM196Q5HYL7 178 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 OR11H6Q8NGC7 330 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 ADAMTS20P59510 1910 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 F5P12259 2224 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 TMEM155Q4W5P6 130 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 ZNF493Q6ZR52 646 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 SLC37A2Q8TED4 501 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 TRGV9Q99603 122 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 AAMDCQ9H7C9 122 aa7.86□□□□□ -1.15
NFKB1-212ENST00000600343 CABIN1Q9Y6J0 2220 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 ORM2P19652 201 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 GATD1Q8NB37 220 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 RFESDQ8TAC1 157 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 FMC1Q96HJ9 113 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 DNAH14Q0VDD8 3507 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 TRAV40A0A0B4J280 105 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 COX7A2P2O60397 106 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 TNFRSF6BO95407 300 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 SRSF9Q13242 221 aaKnown RBP eCLIP7.85□□□□□ -1.15
NFKB1-212ENST00000600343 SRSF12Q8WXF0 261 aaKnown RBP7.85□□□□□ -1.15
NFKB1-212ENST00000600343 KLK5Q9Y337 293 aaPredicted RBP7.85□□□□□ -1.15
NFKB1-212ENST00000600343 ZNHIT1O43257 154 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 PAX8Q06710 450 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 OR4C13Q8NGP0 309 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 MRAPQ8TCY5 172 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 UCN2Q96RP3 112 aa7.85□□□□□ -1.15
NFKB1-212ENST00000600343 F8WDY8 70 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 NGFP01138 241 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 ASCL5Q7RTU5 278 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 SLC22A18ASQ8N1D0 253 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 KIR2DL5BQ8NHK3 375 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 TET1Q8NFU7 2136 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 C12orf77C9JDV5 145 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 CD7P09564 240 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 ZNF542PQ5EBM4 170 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 KNTC1P50748 2209 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 IGHV3-20A0A0C4DH32 117 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 CECR9P0C854 216 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 AMN1Q8IY45 258 aa7.84□□□□□ -1.15
NFKB1-212ENST00000600343 NTN5Q8WTR8 489 aaPredicted RBP7.84□□□□□ -1.15
NFKB1-212ENST00000600343 MAP1BP46821 2468 aaKnown RBP7.84□□□□□ -1.16
NFKB1-212ENST00000600343 SZT2Q5T011 3432 aa7.84□□□□□ -1.16
NFKB1-212ENST00000600343 SEC16AO15027 2179 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 IGHV3-43A0A0B4J1X8 118 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 OTOL1A6NHN0 477 aaPredicted RBP7.83□□□□□ -1.16
NFKB1-212ENST00000600343 C15orf65H3BRN8 121 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 IGHV3-43DP0DP04 118 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 LEPP41159 167 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 TMEM219Q86XT9 240 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 Q8N1Y9 231 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 C3orf22Q8N5N4 141 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 MUC22E2RYF6 1773 aaPredicted RBP7.83□□□□□ -1.16
NFKB1-212ENST00000600343 DEFB108AA8MXU0 73 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 LINC01619G3V211 115 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 DLL1O00548 723 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms