RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MAP6D1Q9H9H5 199 aa10.19□□□□□ -0.78
VRK3-219ENST00000600137 DNAJC4Q9NNZ3 241 aa10.19□□□□□ -0.78
VRK3-219ENST00000600137 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
VRK3-219ENST00000600137 ELOA3CA0A087WX78 387 aaPredicted RBP10.18□□□□□ -0.78
VRK3-219ENST00000600137 Q6ZRG5 221 aa10.18□□□□□ -0.78
VRK3-219ENST00000600137 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
VRK3-219ENST00000600137 SBSPONQ8IVN8 264 aa10.18□□□□□ -0.78
VRK3-219ENST00000600137 STXBP6Q8NFX7 210 aa10.18□□□□□ -0.78
VRK3-219ENST00000600137 SLC25A22Q9H936 323 aa10.18□□□□□ -0.78
VRK3-219ENST00000600137 NRN1Q9NPD7 142 aa10.18□□□□□ -0.78
VRK3-219ENST00000600137 TRAV5A0A0B4J249 113 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 DNASE2O00115 360 aaPredicted RBP10.17□□□□□ -0.78
VRK3-219ENST00000600137 C10orf113Q5VZT2 155 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 APRG1Q8IVJ8 170 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 GATAD1Q8WUU5 269 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 PPP1R14BQ96C90 147 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 SRD5A3Q9H8P0 318 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 SEPSECSQ9HD40 501 aaKnown RBP10.17□□□□□ -0.78
VRK3-219ENST00000600137 CYTL1Q9NRR1 136 aa10.17□□□□□ -0.78
VRK3-219ENST00000600137 HMSDA8MTL9 139 aa10.16□□□□□ -0.78
VRK3-219ENST00000600137 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
VRK3-219ENST00000600137 DEFB131AP59861 70 aa10.16□□□□□ -0.78
VRK3-219ENST00000600137 INO80EQ8NBZ0 244 aaPredicted RBP10.16□□□□□ -0.78
VRK3-219ENST00000600137 OR1L4Q8NGR5 311 aa10.16□□□□□ -0.78
VRK3-219ENST00000600137 GPR82Q96P67 336 aa10.16□□□□□ -0.78
VRK3-219ENST00000600137 TRAV8-2A0A0B4J237 113 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 ARPC5O15511 151 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 IFNA5P01569 189 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 ZNF688P0C7X2 276 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 CXCL2P19875 107 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 CMC4P56277 68 aaPredicted RBP10.15□□□□□ -0.78
VRK3-219ENST00000600137 HAGHQ16775 308 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 SPATA31B1PQ5VZV4 182 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 RPL7L1Q6DKI1 246 aaKnown RBP10.15□□□□□ -0.78
VRK3-219ENST00000600137 TCTE3Q8IZS6 198 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 SCGB1C1Q8TD33 95 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 FAM167A-AS1Q96KT0 104 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 ASCL2Q99929 193 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 MFFQ9GZY8 342 aa10.15□□□□□ -0.78
VRK3-219ENST00000600137 hCG_2014768A0A024R1R8 64 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 A0A087X0K7 114 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
VRK3-219ENST00000600137 GALR1P47211 349 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 CD300CQ08708 224 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 PFDN5Q99471 154 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 TUBA4BQ9H853 241 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 TIMM9Q9Y5J7 89 aa10.14□□□□□ -0.79
VRK3-219ENST00000600137 STAB2Q8WWQ8 2551 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 C17orf112F2Z3M2 114 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 H3BQ15 152 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 ATP6V0CP27449 155 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 S100A7P31151 101 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 DEFB1P60022 68 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 ZNF266Q14584 549 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 FFAR4Q5NUL3 377 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 MIR17HGQ75NE6 70 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 ZNF709Q8N972 641 aa10.13□□□□□ -0.79
VRK3-219ENST00000600137 SAT2Q96F10 170 aaPredicted RBP10.13□□□□□ -0.79
VRK3-219ENST00000600137 ISLRO14498 428 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 SNRPCP09234 159 aaKnown RBP10.12□□□□□ -0.79
VRK3-219ENST00000600137 ZNF345Q14585 488 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 PSMG4Q5JS54 123 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 FAM78BQ5VT40 261 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 IGFL4Q6B9Z1 124 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 S100A7AQ86SG5 101 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 HSD17B11Q8NBQ5 300 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 OR2G3Q8NGZ4 309 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 TM2D3Q9BRN9 247 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
VRK3-219ENST00000600137 SLC25A2Q9BXI2 301 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
VRK3-219ENST00000600137 LOC102724200A0A096LPH7 203 aaPredicted RBP10.11□□□□□ -0.79
VRK3-219ENST00000600137 KNCNA6PVL3 124 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 TAAR5O14804 337 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 HLA-DMBP28068 263 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 PSMB3P49720 205 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 MEOX2P50222 304 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 LGALSLQ3ZCW2 172 aaPredicted RBP10.11□□□□□ -0.79
VRK3-219ENST00000600137 GDF5OSQ5U4N7 250 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 BPIFA4PQ86YQ2 179 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 HRH4Q9H3N8 390 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 ZNF586Q9NXT0 402 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 TMEM14CQ9P0S9 112 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 FUT9Q9Y231 359 aa10.11□□□□□ -0.79
VRK3-219ENST00000600137 H3BTX0 84 aa10.1□□□□□ -0.79
VRK3-219ENST00000600137 SLC17A3O00476 420 aa10.1□□□□□ -0.79
VRK3-219ENST00000600137 EIF3GO75821 320 aaKnown RBP eCLIP10.1□□□□□ -0.79
VRK3-219ENST00000600137 C1QBP02746 253 aa10.1□□□□□ -0.79
VRK3-219ENST00000600137 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
VRK3-219ENST00000600137 RAB2AP61019 212 aa10.1□□□□□ -0.79
VRK3-219ENST00000600137 TRPT1Q86TN4 253 aaKnown RBP10.1□□□□□ -0.79
VRK3-219ENST00000600137 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
VRK3-219ENST00000600137 ZNF331Q9NQX6 463 aaPredicted RBP10.1□□□□□ -0.79
VRK3-219ENST00000600137 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms