RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
SYMPK-213ENST00000599460 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
SYMPK-213ENST00000599460 GTSCR1Q86UQ5 136 aa11.87□□□□□ -0.51
SYMPK-213ENST00000599460 MED13Q9UHV7 2174 aa11.87□□□□□ -0.51
SYMPK-213ENST00000599460 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
SYMPK-213ENST00000599460 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
SYMPK-213ENST00000599460 NPIPB5A8MRT5 1133 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 FOLR2P14207 255 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 TRGV2A0A075B6R0 118 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 NDUFB8O95169 186 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 HOXA5P20719 270 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 M0R3E3 92 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 ZNF324O75467 553 aaPredicted RBP11.86□□□□□ -0.51
SYMPK-213ENST00000599460 PAX9P55771 341 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 KLF2Q9Y5W3 355 aaPredicted RBP11.86□□□□□ -0.51
SYMPK-213ENST00000599460 TCRAP04437 139 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 TCF23Q7RTU1 214 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 DERL1Q9BUN8 251 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 PRORYQ9H606 182 aa11.86□□□□□ -0.51
SYMPK-213ENST00000599460 OVOL3O00110 214 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 APOHP02749 345 aaPredicted RBP11.85□□□□□ -0.51
SYMPK-213ENST00000599460 IGKV3OR2-268A0A0C4DH90 116 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 A0A1B0GW64 132 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 CA1P00915 261 aaPredicted RBP11.85□□□□□ -0.51
SYMPK-213ENST00000599460 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 HOXB4P17483 251 aaPredicted RBP11.85□□□□□ -0.51
SYMPK-213ENST00000599460 RHPN1-AS1Q9BWJ2 59 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 GAGE10A6NGK3 116 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 TMEM50AO95807 157 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 PPP1R17O96001 155 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
SYMPK-213ENST00000599460 C1QL4Q86Z23 238 aa11.85□□□□□ -0.51
SYMPK-213ENST00000599460 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 IL17RELQ6ZVW7 336 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 Q71RC1 249 aaPredicted RBP11.84□□□□□ -0.51
SYMPK-213ENST00000599460 TMEM190Q8WZ59 177 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 SYNJ2BPP57105 145 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
SYMPK-213ENST00000599460 UBE2CO00762 179 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
SYMPK-213ENST00000599460 DAZ1Q9NQZ3 744 aaKnown RBP11.84□□□□□ -0.51
SYMPK-213ENST00000599460 DOCK10Q96BY6 2186 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 HTN3P15516 51 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 C1orf122Q6ZSJ8 110 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 SHANK2-AS3Q9BTD1 123 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 WT1-ASQ06250 92 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 C7orf71A4D174 169 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 PSMB2P49721 201 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 ZNF124Q15973 351 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 OTOGLQ3ZCN5 2332 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
SYMPK-213ENST00000599460 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 C8orf31Q8N9H6 132 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 TSKUQ8WUA8 353 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 FCN3O75636 299 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 NRGNQ92686 78 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 IGHV4-30-2A0A087WSY4 118 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 GZMBP10144 247 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 LYPD6Q86Y78 171 aa11.82□□□□□ -0.52
SYMPK-213ENST00000599460 TRGV11A0A075B6L2 103 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 CMC4P56277 68 aaPredicted RBP11.81□□□□□ -0.52
SYMPK-213ENST00000599460 PMCHL2Q9BQD1 86 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 DAZAP2Q15038 168 aaPredicted RBP11.81□□□□□ -0.52
SYMPK-213ENST00000599460 Q8TAT8 98 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 ZNF138P52744 262 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 PLP1P60201 277 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 CACNG7P62955 275 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 ACTL10Q5JWF8 245 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 SMIM12Q96EX1 92 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 ADMP35318 185 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 LINC01551Q86U37 167 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 ATOH7Q8N100 152 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
SYMPK-213ENST00000599460 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
SYMPK-213ENST00000599460 CRXO43186 299 aaPredicted RBP11.8□□□□□ -0.52
SYMPK-213ENST00000599460 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
SYMPK-213ENST00000599460 PSG3Q16557 428 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 OR10J3Q5JRS4 329 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 TMEM238LA0A1B0GVL6 79 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 A6NJY4 79 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 FBXL19-AS1Q494R0 122 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 RNF114Q9Y508 228 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 H3BVH4 76 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 GEMIN7Q9H840 131 aaKnown RBP11.8□□□□□ -0.52
SYMPK-213ENST00000599460 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
SYMPK-213ENST00000599460 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 NDUFAF3Q9BU61 184 aa11.8□□□□□ -0.52
SYMPK-213ENST00000599460 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
SYMPK-213ENST00000599460 FABP2P12104 132 aa11.79□□□□□ -0.52
SYMPK-213ENST00000599460 MSMPQ1L6U9 139 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms