RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 ZDBF2Q9HCK1 2354 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 C9JAW5 83 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 PSCAO43653 123 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
SCN8A-208ENST00000599343 TMEM178BH3BS89 294 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 H3BUX3 64 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 FAM166AQ6J272 317 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 ZNF329Q86UD4 541 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 TMEM14EPQ6UXP3 125 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 COL11A2P13942 1736 aaPredicted RBP9.66□□□□□ -0.86
SCN8A-208ENST00000599343 MLANAQ16655 118 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 E9PLN8 166 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 PRIMA1Q86XR5 153 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 C9orf139Q6ZV77 190 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 STPG4Q8N801 248 aa9.66□□□□□ -0.86
SCN8A-208ENST00000599343 UBE2V1Q13404 147 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 RBBP6Q7Z6E9 1792 aaKnown RBP9.65□□□□□ -0.86
SCN8A-208ENST00000599343 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 ZNF664Q8N3J9 261 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 TRBV7-1A0A0A6YYK4 115 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 LINC00477Q96M19 166 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 PATJQ8NI35 1801 aa9.65□□□□□ -0.86
SCN8A-208ENST00000599343 LINC00479Q96M42 142 aa9.65□□□□□ -0.87
SCN8A-208ENST00000599343 PARP14Q460N5 1801 aa9.65□□□□□ -0.87
SCN8A-208ENST00000599343 EP300Q09472 2414 aaPredicted RBP9.65□□□□□ -0.87
SCN8A-208ENST00000599343 SPACA3Q8IXA5 215 aa9.65□□□□□ -0.87
SCN8A-208ENST00000599343 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.87
SCN8A-208ENST00000599343 GAFA1Q96PS6 74 aa9.65□□□□□ -0.87
SCN8A-208ENST00000599343 CACNA1DQ01668 2161 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 SPSB3Q6PJ21 355 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 C5orf64Q2M2E5 130 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 LTBP4Q8N2S1 1624 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 DOCK4Q8N1I0 1966 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 GAGE12BA1L429 117 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 BUB1B-PAK6H3BSN5 160 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 CACNA1EQ15878 2313 aa9.64□□□□□ -0.87
SCN8A-208ENST00000599343 CHD5Q8TDI0 1954 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 CFHR1Q03591 330 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 MAJINQ3KP22 176 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 C15orf62A8K5M9 175 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 EFNA4P52798 201 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 ZFP36L1Q07352 338 aaKnown RBP9.63□□□□□ -0.87
SCN8A-208ENST00000599343 PNRC2Q9NPJ4 139 aaKnown RBP9.63□□□□□ -0.87
SCN8A-208ENST00000599343 PLSCR4Q9NRQ2 329 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 MRPL27Q9P0M9 148 aaKnown RBP9.63□□□□□ -0.87
SCN8A-208ENST00000599343 EREGO14944 169 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
SCN8A-208ENST00000599343 Q86TA4 180 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 MSRB2Q9Y3D2 182 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 KLF12Q9Y4X4 402 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 PDCD11Q14690 1871 aaKnown RBP9.63□□□□□ -0.87
SCN8A-208ENST00000599343 KNCNA6PVL3 124 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 IL18BPO95998 194 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 DTX1Q86Y01 620 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 SIGLEC9Q9Y336 463 aa9.63□□□□□ -0.87
SCN8A-208ENST00000599343 A0A1B0GUS0 222 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 CMC4P56277 68 aaPredicted RBP9.62□□□□□ -0.87
SCN8A-208ENST00000599343 SS18Q15532 418 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 ZNF114Q8NC26 417 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 RHPN1-AS1Q9BWJ2 59 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 DOPEY2Q9Y3R5 2298 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 MINOS1Q5TGZ0 78 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 Q6P435 159 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 COX11Q9Y6N1 276 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 MINOS1-NBL1R4GNA1 71 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 TMEM213A2RRL7 107 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 DKK1O94907 266 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 CFHR3Q02985 330 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 LY96Q9Y6Y9 160 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 TRIOBPQ9H2D6 2365 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 SDK2Q58EX2 2172 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 ARMS2P0C7Q2 107 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 CASP8AP2Q9UKL3 1982 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 LY6HO94772 140 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 TCF15Q12870 199 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 LY6G5BQ8NDX9 201 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 LIME1Q9H400 295 aa9.62□□□□□ -0.87
SCN8A-208ENST00000599343 RNASE2P10153 161 aaKnown RBP9.61□□□□□ -0.87
SCN8A-208ENST00000599343 ADCYAP1P18509 176 aa9.61□□□□□ -0.87
SCN8A-208ENST00000599343 ZNRD1Q9P1U0 126 aa9.61□□□□□ -0.87
SCN8A-208ENST00000599343 IGKV1D-17A0A075B6S4 117 aa9.61□□□□□ -0.87
SCN8A-208ENST00000599343 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
SCN8A-208ENST00000599343 CD5LO43866 347 aa9.61□□□□□ -0.87
SCN8A-208ENST00000599343 SUMO4Q6EEV6 95 aa9.61□□□□□ -0.87
SCN8A-208ENST00000599343 CFHR2P36980 270 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 Q0VFX4 171 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms