RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 C9orf66Q5T8R8 295 aa7.22□□□□□ -1.25
FARP1-226ENST00000599040 CLEC19AQ6UXS0 136 aa7.22□□□□□ -1.25
FARP1-226ENST00000599040 C4orf3Q8WVX3 66 aa7.22□□□□□ -1.25
FARP1-226ENST00000599040 RNF125Q96EQ8 232 aa7.22□□□□□ -1.25
FARP1-226ENST00000599040 SLC35B3Q9H1N7 401 aa7.22□□□□□ -1.25
FARP1-226ENST00000599040 MRPL36Q9P0J6 103 aaKnown RBP7.22□□□□□ -1.25
FARP1-226ENST00000599040 LOC102723971A0A1B0GUV8 181 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 WI2-2373I1.2A0A1W2PRP0 233 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 TMEM218A2RU14 115 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 F6UZH7 168 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.26
FARP1-226ENST00000599040 PDE6DO43924 150 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 IGKV1-17P01599 117 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 IGLV1-40P01703 118 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 IGHV3-23P01764 117 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 BMI1P35226 326 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 UBE2L3P68036 154 aaKnown RBP7.21□□□□□ -1.26
FARP1-226ENST00000599040 MEF2BQ02080 365 aaPredicted RBP7.21□□□□□ -1.26
FARP1-226ENST00000599040 CST9LP1Q5W188 147 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 LCNL1Q6ZST4 164 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 MIR17HGQ75NE6 70 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 BPIFA4PQ86YQ2 179 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 RAX2Q96IS3 184 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 B9D2Q9BPU9 175 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 PAXXQ9BUH6 204 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 OR51M1Q9H341 326 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 S4R3C0 116 aa7.21□□□□□ -1.26
FARP1-226ENST00000599040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.2□□□□□ -1.26
FARP1-226ENST00000599040 CD5P06127 495 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 CTSGP08311 255 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 SFTA3P0C7M3 94 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 PSMB8P28062 276 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 CEBPGP53567 150 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 CCL20P78556 96 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 CFHR3Q02985 330 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 FAM106AQ4KMX7 169 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 SOHLH1Q5JUK2 328 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 C18orf65Q6ZTR6 163 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 SSX7Q7RTT5 188 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 RXFP4Q8TDU9 374 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 TMEM37Q8WXS4 190 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 GRAMD2BQ96HH9 432 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 GPR82Q96P67 336 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 METTL26Q96S19 204 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 SEC11CQ9BY50 192 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 TMEM231Q9H6L2 316 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 SEPSECSQ9HD40 501 aaKnown RBP7.2□□□□□ -1.26
FARP1-226ENST00000599040 PUS1Q9Y606 427 aaKnown RBP eCLIP7.2□□□□□ -1.26
FARP1-226ENST00000599040 TENM3Q9P273 2699 aa7.2□□□□□ -1.26
FARP1-226ENST00000599040 A0A1W2PS18 150 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 C11orf94C9JXX5 98 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 TMEM250H0YL14 139 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 NDUFA4O00483 81 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 PAGE4O60829 102 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 GGCTO75223 188 aaKnown RBP7.19□□□□□ -1.26
FARP1-226ENST00000599040 RPL7P18124 248 aaKnown RBP7.19□□□□□ -1.26
FARP1-226ENST00000599040 NPPCP23582 126 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 INSL3P51460 131 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 ICAM4Q14773 271 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 DEFB136Q30KP8 78 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 SPATA31B1PQ5VZV4 182 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 ZNF343Q6P1L6 599 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 SVBPQ8N300 66 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 ZNF491Q8N8L2 437 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 RPUSD4Q96CM3 377 aaKnown RBP7.19□□□□□ -1.26
FARP1-226ENST00000599040 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 DUX3Q96PT4 197 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 TCEAL7Q9BRU2 100 aa7.19□□□□□ -1.26
FARP1-226ENST00000599040 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
FARP1-226ENST00000599040 MRPL27Q9P0M9 148 aaKnown RBP7.19□□□□□ -1.26
FARP1-226ENST00000599040 PEF1Q9UBV8 284 aaKnown RBP7.19□□□□□ -1.26
FARP1-226ENST00000599040 A0A1W2PRE2 83 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 H3BRN7 92 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 SNAPINO95295 136 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 APOC3P02656 99 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 NHLRC4P0CG21 123 aaPredicted RBP7.18□□□□□ -1.26
FARP1-226ENST00000599040 MEOX2P50222 304 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 UBE2G2P60604 165 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 DEFA5Q01523 94 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 FHL3Q13643 280 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 PATE2Q6UY27 113 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 OR8I2Q8N0Y5 310 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 OR11H1Q8NG94 326 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 CCDC140Q96MF4 163 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 RARRES2Q99969 163 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 NIPSNAP3BQ9BS92 247 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 SHANK2-AS3Q9BTD1 123 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 CHRDL1Q9BU40 450 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 ELOVL1Q9BW60 279 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 TMPRSS5Q9H3S3 457 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 DNAH9Q9NYC9 4486 aa7.18□□□□□ -1.26
FARP1-226ENST00000599040 ZNF98A6NK75 572 aa7.17□□□□□ -1.26
FARP1-226ENST00000599040 F8W735 103 aaPredicted RBP7.17□□□□□ -1.26
FARP1-226ENST00000599040 IGHV3-11P01762 117 aa7.17□□□□□ -1.26
FARP1-226ENST00000599040 LGALS1P09382 135 aaKnown RBP7.17□□□□□ -1.26
FARP1-226ENST00000599040 NBEAP1P0C6P0 100 aa7.17□□□□□ -1.26
FARP1-226ENST00000599040 HIST1H1EP10412 219 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms