RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 OR4C46A6NHA9 309 aa16.59■□□□□ 0.25
CHMP2A-204ENST00000597848 ATP6V0CP27449 155 aa16.59■□□□□ 0.25
CHMP2A-204ENST00000597848 SLC25A32Q9H2D1 315 aa16.59■□□□□ 0.25
CHMP2A-204ENST00000597848 MS4A6AQ9H2W1 248 aa16.59■□□□□ 0.25
CHMP2A-204ENST00000597848 CYTL1Q9NRR1 136 aa16.59■□□□□ 0.25
CHMP2A-204ENST00000597848 SORL1Q92673 2214 aa16.58■□□□□ 0.25
CHMP2A-204ENST00000597848 NBEAL1Q6ZS30 2694 aa16.58■□□□□ 0.25
CHMP2A-204ENST00000597848 GALR1P47211 349 aa16.58■□□□□ 0.24
CHMP2A-204ENST00000597848 DEFA6Q01524 100 aa16.58■□□□□ 0.24
CHMP2A-204ENST00000597848 GNPNAT1Q96EK6 184 aaPredicted RBP16.58■□□□□ 0.24
CHMP2A-204ENST00000597848 GPR82Q96P67 336 aa16.58■□□□□ 0.24
CHMP2A-204ENST00000597848 BCL2L11O43521 198 aa16.57■□□□□ 0.24
CHMP2A-204ENST00000597848 CD81P60033 236 aa16.57■□□□□ 0.24
CHMP2A-204ENST00000597848 LGALSLQ3ZCW2 172 aaPredicted RBP16.57■□□□□ 0.24
CHMP2A-204ENST00000597848 CD7P09564 240 aa16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 RPL7P18124 248 aaKnown RBP16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 ACOT6Q3I5F7 207 aaPredicted RBP16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 FAM78BQ5VT40 261 aa16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 MORN5Q5VZ52 161 aa16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 PSMG3Q9BT73 122 aaPredicted RBP16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 ZNF471Q9BX82 626 aaPredicted RBP16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 SH3BGRL3Q9H299 93 aa16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 NRN1Q9NPD7 142 aa16.56■□□□□ 0.24
CHMP2A-204ENST00000597848 TRAV5A0A0B4J249 113 aa16.55■□□□□ 0.24
CHMP2A-204ENST00000597848 TRAV2A0A0B4J234 112 aa16.54■□□□□ 0.24
CHMP2A-204ENST00000597848 ATF4P18848 351 aaPredicted RBP16.54■□□□□ 0.24
CHMP2A-204ENST00000597848 OR2G3Q8NGZ4 309 aa16.54■□□□□ 0.24
CHMP2A-204ENST00000597848 SEPSECSQ9HD40 501 aaKnown RBP16.54■□□□□ 0.24
CHMP2A-204ENST00000597848 SMAD5-AS1Q9Y6J3 95 aa16.54■□□□□ 0.24
CHMP2A-204ENST00000597848 K7EIL1 84 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 M6PRP20645 277 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 SERF2P84101 59 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 SPATA31B1PQ5VZV4 182 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 BPIFA4PQ86YQ2 179 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 UBQLN2Q9UHD9 624 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 FUT9Q9Y231 359 aa16.53■□□□□ 0.24
CHMP2A-204ENST00000597848 K7EQG2 157 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 CMC4P56277 68 aaPredicted RBP16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 RAB2AP61019 212 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 RHOBP62745 196 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 EIF5AP63241 154 aaKnown RBP16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 DEFB121Q5J5C9 76 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 MIR17HGQ75NE6 70 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 Q8N1Y9 231 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 OR10G4Q8NGN3 311 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 OR10G9Q8NGN4 311 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 OR10G7Q8NGN6 311 aa16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 MRPL32Q9BYC8 188 aaKnown RBP16.52■□□□□ 0.24
CHMP2A-204ENST00000597848 A0A1W2PPV4 95 aa16.51■□□□□ 0.23
CHMP2A-204ENST00000597848 MBP02144 154 aa16.51■□□□□ 0.23
CHMP2A-204ENST00000597848 DCANP1Q8TF63 244 aa16.51■□□□□ 0.23
CHMP2A-204ENST00000597848 OR11H12B2RN74 326 aa16.5■□□□□ 0.23
CHMP2A-204ENST00000597848 C4BPBP20851 252 aa16.5■□□□□ 0.23
CHMP2A-204ENST00000597848 FAM122CQ6P4D5 195 aa16.5■□□□□ 0.23
CHMP2A-204ENST00000597848 C9orf62Q8N4C0 152 aa16.5■□□□□ 0.23
CHMP2A-204ENST00000597848 FAM24BQ8N5W8 94 aa16.5■□□□□ 0.23
CHMP2A-204ENST00000597848 MRAPQ8TCY5 172 aa16.5■□□□□ 0.23
CHMP2A-204ENST00000597848 SNRPCP09234 159 aaKnown RBP16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 ZNF688P0C7X2 276 aa16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 ID1P41134 155 aa16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 MEOX2P50222 304 aa16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 NKX2-5P52952 324 aaPredicted RBP16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 DEFB125Q8N687 156 aa16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 SLC25A2Q9BXI2 301 aa16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 WFDC10AQ9H1F0 79 aa16.49■□□□□ 0.23
CHMP2A-204ENST00000597848 MRPS12O15235 138 aaKnown RBP16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 SPP1P10451 314 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 TPT1P13693 172 aaKnown RBP16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 DEFB131AP59861 70 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 SNRPD3P62318 126 aaKnown RBP16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 ODF3L2Q3SX64 289 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 TMEM41BQ5BJD5 291 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 AKR1C8PQ5T2L2 129 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 BAP18Q8IXM2 172 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 LRRC20Q8TCA0 184 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 C16orf92Q96LL3 132 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 TUBA4BQ9H853 241 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 MAP6D1Q9H9H5 199 aa16.48■□□□□ 0.23
CHMP2A-204ENST00000597848 TAS2R45P59539 299 aa16.47■□□□□ 0.23
CHMP2A-204ENST00000597848 SAMD13Q5VXD3 122 aa16.47■□□□□ 0.23
CHMP2A-204ENST00000597848 C17orf77Q96MU5 243 aa16.47■□□□□ 0.23
CHMP2A-204ENST00000597848 LINC00052Q96N35 136 aa16.47■□□□□ 0.23
CHMP2A-204ENST00000597848 C19orf73Q9NVV2 129 aa16.47■□□□□ 0.23
CHMP2A-204ENST00000597848 TMEM14CQ9P0S9 112 aa16.47■□□□□ 0.23
CHMP2A-204ENST00000597848 A0A087X0K7 114 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 H3BTX0 84 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 OR7C2O60412 319 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 EIF3GO75821 320 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 PYYP10082 97 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 CDC34P49427 236 aaPredicted RBP16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 PSMG4Q5JS54 123 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 APRG1Q8IVJ8 170 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 FAM167A-AS1Q96KT0 104 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 FAM110AQ9BQ89 295 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 OR51M1Q9H341 326 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 RPRMQ9NS64 109 aa16.46■□□□□ 0.23
CHMP2A-204ENST00000597848 H3BQ15 152 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 ISLRO14498 428 aa16.45■□□□□ 0.22
CHMP2A-204ENST00000597848 SOCS3O14543 225 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms