RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 MEOX2P50222 304 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 FGL1Q08830 312 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 PPP1R1AQ13522 171 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 RNF212Q495C1 297 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 PYDC2Q56P42 97 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 SPANXN5Q5MJ07 72 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 GGNBP1Q5YKI7 109 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 BAP18Q8IXM2 172 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 OR11H7Q8NGC8 314 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 MCFD2Q8NI22 146 aa11.34□□□□□ -0.59
LIM2-202ENST00000596399 TRAV12-2A0A075B6T6 113 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 SFT2D2O95562 160 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 DEFB130BP0DP73 79 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 DEFB130AP0DP74 79 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 SLC25A6P12236 298 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 AKR1C1Q04828 323 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 TOMM5Q8N4H5 51 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 BPIFCQ8NFQ6 507 aa11.33□□□□□ -0.6
LIM2-202ENST00000596399 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
LIM2-202ENST00000596399 HSPG2P98160 4391 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 MED6O75586 246 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 C1orf134Q5TEV5 83 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 TMEM147Q9BVK8 224 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 SLC45A2Q9UMX9 530 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 TMED3Q9Y3Q3 217 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 V9GYH0 126 aa11.32□□□□□ -0.6
LIM2-202ENST00000596399 MUC4Q99102 2169 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 ADAP1O75689 374 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
LIM2-202ENST00000596399 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
LIM2-202ENST00000596399 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 UHRF2Q96PU4 802 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 CIB3Q96Q77 187 aaPredicted RBP11.31□□□□□ -0.6
LIM2-202ENST00000596399 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
LIM2-202ENST00000596399 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
LIM2-202ENST00000596399 H3BRN7 92 aa11.3□□□□□ -0.6
LIM2-202ENST00000596399 CCNKO75909 580 aa11.3□□□□□ -0.6
LIM2-202ENST00000596399 INSP01308 110 aa11.3□□□□□ -0.6
LIM2-202ENST00000596399 POLR2GP62487 172 aaKnown RBP eCLIP11.3□□□□□ -0.6
LIM2-202ENST00000596399 RPP30P78346 268 aaKnown RBP11.3□□□□□ -0.6
LIM2-202ENST00000596399 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
LIM2-202ENST00000596399 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
LIM2-202ENST00000596399 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
LIM2-202ENST00000596399 LRP1BQ9NZR2 4599 aa11.29□□□□□ -0.6
LIM2-202ENST00000596399 F5H768 121 aa11.29□□□□□ -0.6
LIM2-202ENST00000596399 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
LIM2-202ENST00000596399 IL5P05113 134 aa11.29□□□□□ -0.6
LIM2-202ENST00000596399 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
LIM2-202ENST00000596399 HTN1P15515 57 aa11.29□□□□□ -0.6
LIM2-202ENST00000596399 TNP2Q05952 138 aa11.29□□□□□ -0.6
LIM2-202ENST00000596399 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
LIM2-202ENST00000596399 PIGBOS1A0A0B4J2F0 54 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 PMS2P5A8MQ11 134 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 NUDT3O95989 172 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 AP3S2P59780 193 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 RRAS2P62070 204 aaPredicted RBP11.28□□□□□ -0.6
LIM2-202ENST00000596399 HIST1H1AQ02539 215 aaPredicted RBP11.28□□□□□ -0.6
LIM2-202ENST00000596399 SOHLH1Q5JUK2 328 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 GPR82Q96P67 336 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 SLC25A21Q9BQT8 299 aaPredicted RBP11.28□□□□□ -0.6
LIM2-202ENST00000596399 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 HIGD1AQ9Y241 93 aa11.28□□□□□ -0.6
LIM2-202ENST00000596399 BOLA2-SMG1P6H3BVE0 249 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.61
LIM2-202ENST00000596399 OR5G3P0C626 314 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 CXCL3P19876 107 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 RHOBP62745 196 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 ID3Q02535 119 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 PATE2Q6UY27 113 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 C15orf53Q8NAA6 179 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 ZNRF2Q8NHG8 242 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 LINC01587Q99440 93 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 PSENENQ9NZ42 101 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 FLVCR2Q9UPI3 526 aa11.27□□□□□ -0.61
LIM2-202ENST00000596399 SSSCA1O60232 199 aa11.26□□□□□ -0.61
LIM2-202ENST00000596399 HYPMO75409 117 aa11.26□□□□□ -0.61
LIM2-202ENST00000596399 LINC00869P0C866 280 aa11.26□□□□□ -0.61
LIM2-202ENST00000596399 RAP2BP61225 183 aa11.26□□□□□ -0.61
LIM2-202ENST00000596399 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
LIM2-202ENST00000596399 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
LIM2-202ENST00000596399 NBDYA0A0U1RRE5 68 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 C9orf170A2RU37 121 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 METTL15P1P0C7V9 234 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
LIM2-202ENST00000596399 TSPOP30536 169 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 PSG3Q16557 428 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
LIM2-202ENST00000596399 ARL6Q9H0F7 186 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
LIM2-202ENST00000596399 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
LIM2-202ENST00000596399 PLP1P60201 277 aa11.24□□□□□ -0.61
LIM2-202ENST00000596399 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
LIM2-202ENST00000596399 CCDC190Q86UF4 302 aa11.24□□□□□ -0.61
LIM2-202ENST00000596399 RNF141Q8WVD5 230 aa11.24□□□□□ -0.61
LIM2-202ENST00000596399 A0A087X0K7 114 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms