RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 C2orf83Q53S99 150 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 OR1B1Q8NGR6 318 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 NEU4Q8WWR8 484 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 TMEM191AQ9H0A3 160 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 CSMD1Q96PZ7 3565 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 FLNCQ14315 2725 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 CGB1A6NKQ9 187 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 NDUFS7O75251 213 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 GATA2P23769 480 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 OR4A5Q8NH83 315 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 PMCHL2Q9BQD1 86 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 VPS13CQ709C8 3753 aa13.64□□□□□ -0.23
SHKBP1-205ENST00000594973 IGHV1-3A0A0C4DH29 117 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 C19orf84I3L1E1 186 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 IGLV2-8P01709 118 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 IGKV1OR2-108A0A075B7D4 117 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 PRSS47A8MTI9 375 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 FAM120AOSQ5T036 256 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 DTX2Q86UW9 622 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 C8orf46Q8TAG6 207 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 RPEQ96AT9 228 aa13.63□□□□□ -0.23
SHKBP1-205ENST00000594973 C7orf71A4D174 169 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 APELAP0DMC3 54 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 SPATA31B1PQ5VZV4 182 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 KIR3DL3Q8N743 410 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 FOXH1O75593 365 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 IGHV3-48P01763 117 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 CEACAM3P40198 252 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 LGALS7P47929 136 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 NEGR1Q7Z3B1 354 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 LY6G5BQ8NDX9 201 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 OR2T6Q8NHC8 308 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 IGF2BP2-AS1Q96M15 143 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 SSBP3Q9BWW4 388 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 SERTAD4Q9NUC0 356 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
SHKBP1-205ENST00000594973 ACTL6BO94805 426 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 RBP4P02753 201 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 SMIM17P0DL12 118 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 GPR183P32249 361 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 PRSS57Q6UWY2 283 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 FAM231DQ6ZW35 169 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 CHCHD1Q96BP2 118 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 MBD6Q96DN6 1003 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 GPR6P46095 362 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 CD69Q07108 199 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 MRGPRG-AS1Q2M3A8 158 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 SAMD13Q5VXD3 122 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 CLEC5AQ9NY25 188 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 TP73-AS1Q9UF72 201 aa13.61□□□□□ -0.23
SHKBP1-205ENST00000594973 A0A1W2PPI3 338 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 MFAP2P55001 183 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 PRR20EP86478 221 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 PRR20CP86479 221 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 PRR20DP86480 221 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 PRR20BP86481 221 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 PRR20AP86496 221 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 C5orf17Q8NAS9 161 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 CHRDL1Q9BU40 450 aa13.6□□□□□ -0.23
SHKBP1-205ENST00000594973 A0A1W2PRD5 423 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 A0A1W2PRF3 423 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 A0A1W2PRM7 423 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 FNDC10F2Z333 226 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 KLRD1Q13241 179 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 PSG3Q16557 428 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 ATP5L2Q7Z4Y8 100 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 AMMECR1Q9Y4X0 333 aaPredicted RBP13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 OR5AL1P0C617 328 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 MGST1P10620 155 aaKnown RBP13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 PSG5Q15238 335 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 GDF5OSQ5U4N7 250 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 GRAMD2BQ96HH9 432 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 URB1-AS1Q96HZ7 61 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 SMPXQ9UHP9 88 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 HILPDAQ9Y5L2 63 aa13.59□□□□□ -0.23
SHKBP1-205ENST00000594973 FAM231BA6NCW3 169 aa13.58□□□□□ -0.23
SHKBP1-205ENST00000594973 C9orf118A6NHY6 69 aa13.58□□□□□ -0.23
SHKBP1-205ENST00000594973 H3BRM9 83 aa13.58□□□□□ -0.23
SHKBP1-205ENST00000594973 HCP5Q6MZN7 132 aa13.58□□□□□ -0.23
SHKBP1-205ENST00000594973 K7EP34 96 aa13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 LEPROTL1O95214 131 aa13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 AP1S3Q96PC3 154 aa13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 FNDC4Q9H6D8 234 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 SIGLEC9Q9Y336 463 aa13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 MAP1AP78559 2803 aaPredicted RBP13.58□□□□□ -0.24
SHKBP1-205ENST00000594973 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 A0A087X0K7 114 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 INS-IGF2F8WCM5 200 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 LY6LH3BQJ8 138 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 SSBP2P81877 361 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 MIR17HGQ75NE6 70 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 NUP35Q8NFH5 326 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 FBXL15Q9H469 300 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 A0A1W2PRE2 83 aa13.57□□□□□ -0.24
SHKBP1-205ENST00000594973 TIMM23O14925 209 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms