RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SELENOTP62341 195 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 OR10P1Q8NGE3 313 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 SCRT1Q9BWW7 348 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 SLC25A39Q9BZJ4 359 aaPredicted RBP16.88■□□□□ 0.29
LSM4-204ENST00000594828 HIGD1AQ9Y241 93 aa16.88■□□□□ 0.29
LSM4-204ENST00000594828 TSC22D2O75157 780 aa16.87■□□□□ 0.29
LSM4-204ENST00000594828 HYPMO75409 117 aa16.87■□□□□ 0.29
LSM4-204ENST00000594828 ZNF767PQ75MW2 155 aa16.87■□□□□ 0.29
LSM4-204ENST00000594828 SHANK2-AS3Q9BTD1 123 aa16.87■□□□□ 0.29
LSM4-204ENST00000594828 MGAT4CQ9UBM8 478 aa16.87■□□□□ 0.29
LSM4-204ENST00000594828 KMT2AQ03164 3969 aa16.87■□□□□ 0.29
LSM4-204ENST00000594828 FNDC10F2Z333 226 aa16.86■□□□□ 0.29
LSM4-204ENST00000594828 H3BRN7 92 aa16.86■□□□□ 0.29
LSM4-204ENST00000594828 OR5G3P0C626 314 aa16.86■□□□□ 0.29
LSM4-204ENST00000594828 LINC00869P0C866 280 aa16.86■□□□□ 0.29
LSM4-204ENST00000594828 PLP1P60201 277 aa16.86■□□□□ 0.29
LSM4-204ENST00000594828 RCL1Q9Y2P8 373 aaKnown RBP16.86■□□□□ 0.29
LSM4-204ENST00000594828 IGHV4-4A0A075B6R2 117 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 TMEM189A5PLL7 270 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 MBPP02686 304 aaPredicted RBP16.85■□□□□ 0.29
LSM4-204ENST00000594828 TCRBP04435 133 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 EMP1P54849 157 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 FGL1Q08830 312 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 TEPPQ6URK8 271 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 GOLT1BQ9Y3E0 138 aa16.85■□□□□ 0.29
LSM4-204ENST00000594828 TRAV6A0A075B6T7 132 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 DEFB131BA0A096LNP1 70 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 C7orf66A4D0T2 115 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 SPART-AS1P0CW21 52 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 RPL7P18124 248 aaKnown RBP16.84■□□□□ 0.29
LSM4-204ENST00000594828 PRR20EP86478 221 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 PRR20CP86479 221 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 PRR20DP86480 221 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 PRR20BP86481 221 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 PRR20AP86496 221 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 ZNF846Q147U1 533 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 IGFL4Q6B9Z1 124 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 S100A7AQ86SG5 101 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 RNF126Q9BV68 326 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 RFNGQ9Y644 331 aa16.84■□□□□ 0.29
LSM4-204ENST00000594828 CCSO14618 274 aa16.83■□□□□ 0.28
LSM4-204ENST00000594828 UHRF2Q96PU4 802 aa16.83■□□□□ 0.28
LSM4-204ENST00000594828 ARL6Q9H0F7 186 aa16.83■□□□□ 0.28
LSM4-204ENST00000594828 TRAV8-2A0A0B4J237 113 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 A8MTW9 85 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 K7EPK0 472 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 SLC38A11Q08AI6 406 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 C1orf158Q8N1D5 194 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 GGACTQ9BVM4 153 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 NUDT15Q9NV35 164 aa16.82■□□□□ 0.28
LSM4-204ENST00000594828 FAM25EA8MYX2 175 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 L7N2F9 121 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 DUSP14O95147 198 aaKnown RBP16.81■□□□□ 0.28
LSM4-204ENST00000594828 VAMP2P63027 116 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 ARL16Q0P5N6 197 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 AMTNQ6UX39 209 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 RNF182Q8N6D2 247 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 ZNF431Q8TF32 576 aaPredicted RBP16.81■□□□□ 0.28
LSM4-204ENST00000594828 CCDC32Q9BV29 185 aa16.81■□□□□ 0.28
LSM4-204ENST00000594828 GOSR2O14653 212 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 HBE1P02100 147 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 CNN1P51911 297 aaKnown RBP16.8■□□□□ 0.28
LSM4-204ENST00000594828 PXDC1Q5TGL8 231 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 PATE2Q6UY27 113 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 SEC22CQ9BRL7 303 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 ARV1Q9H2C2 271 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 RNF24Q9Y225 148 aa16.8■□□□□ 0.28
LSM4-204ENST00000594828 LSM5Q9Y4Y9 91 aaKnown RBP16.8■□□□□ 0.28
LSM4-204ENST00000594828 C5orf51A6NDU8 294 aa16.79■□□□□ 0.28
LSM4-204ENST00000594828 ZNF546Q86UE3 836 aa16.79■□□□□ 0.28
LSM4-204ENST00000594828 ZNF738Q8NE65 137 aa16.79■□□□□ 0.28
LSM4-204ENST00000594828 IGF2BP2-AS1Q96M15 143 aa16.79■□□□□ 0.28
LSM4-204ENST00000594828 DKK2Q9UBU2 259 aa16.79■□□□□ 0.28
LSM4-204ENST00000594828 AGPAT2O15120 278 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 AMBPP02760 352 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 BCAP31P51572 246 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 RRN3P1Q2M238 152 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 C12orf45Q8N5I9 185 aaPredicted RBP16.78■□□□□ 0.28
LSM4-204ENST00000594828 OR11H7Q8NGC8 314 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 LRRC20Q8TCA0 184 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 TMEM208Q9BTX3 173 aa16.78■□□□□ 0.28
LSM4-204ENST00000594828 A0A087X0K7 114 aa16.77■□□□□ 0.28
LSM4-204ENST00000594828 TEX48A0A1B0GUV7 120 aa16.77■□□□□ 0.28
LSM4-204ENST00000594828 LOC102723971A0A1B0GUV8 181 aa16.77■□□□□ 0.28
LSM4-204ENST00000594828 H2AFB2P0C5Z0 115 aa16.77■□□□□ 0.28
LSM4-204ENST00000594828 FAM222AQ5U5X8 452 aa16.77■□□□□ 0.28
LSM4-204ENST00000594828 NDUFAF3Q9BU61 184 aa16.77■□□□□ 0.28
LSM4-204ENST00000594828 FAM240BA0A1B0GVZ2 78 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 CXCL3P19876 107 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 CAV2P51636 162 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 SPINK13Q1W4C9 94 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 LINC00305Q7Z4B0 112 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 C2orf50Q96LR7 162 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 MGST2Q99735 147 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 NIPSNAP3BQ9BS92 247 aa16.76■□□□□ 0.27
LSM4-204ENST00000594828 VPS13DQ5THJ4 4388 aa16.75■□□□□ 0.27
LSM4-204ENST00000594828 M0R2Z0 102 aa16.75■□□□□ 0.27
LSM4-204ENST00000594828 PSG3Q16557 428 aa16.75■□□□□ 0.27
LSM4-204ENST00000594828 LINC00299Q6ZSB3 139 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms