RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMEM88Q6PEY1 159 aa16.94■□□□□ 0.3
LSM4-202ENST00000593564 TMEM182Q6ZP80 229 aaPredicted RBP16.94■□□□□ 0.3
LSM4-202ENST00000593564 SLC25A21Q9BQT8 299 aaPredicted RBP16.94■□□□□ 0.3
LSM4-202ENST00000593564 TMEM208Q9BTX3 173 aa16.94■□□□□ 0.3
LSM4-202ENST00000593564 ABCA13Q86UQ4 5058 aa16.94■□□□□ 0.3
LSM4-202ENST00000593564 WRBO00258 174 aa16.93■□□□□ 0.3
LSM4-202ENST00000593564 ORM2P19652 201 aa16.93■□□□□ 0.3
LSM4-202ENST00000593564 GATA2P23769 480 aaPredicted RBP16.93■□□□□ 0.3
LSM4-202ENST00000593564 TMEM147Q9BVK8 224 aa16.93■□□□□ 0.3
LSM4-202ENST00000593564 DUSP14O95147 198 aaKnown RBP16.92■□□□□ 0.3
LSM4-202ENST00000593564 CNN1P51911 297 aaKnown RBP16.92■□□□□ 0.3
LSM4-202ENST00000593564 PPP1R1AQ13522 171 aa16.92■□□□□ 0.3
LSM4-202ENST00000593564 PYDC2Q56P42 97 aa16.92■□□□□ 0.3
LSM4-202ENST00000593564 SOHLH1Q5JUK2 328 aa16.92■□□□□ 0.3
LSM4-202ENST00000593564 DEDD2Q8WXF8 326 aa16.92■□□□□ 0.3
LSM4-202ENST00000593564 AKR1C1Q04828 323 aa16.91■□□□□ 0.3
LSM4-202ENST00000593564 SPANXN5Q5MJ07 72 aa16.91■□□□□ 0.3
LSM4-202ENST00000593564 ACOT7LQ6ZUV0 252 aa16.91■□□□□ 0.3
LSM4-202ENST00000593564 OR11H7Q8NGC8 314 aa16.91■□□□□ 0.3
LSM4-202ENST00000593564 TRAV8-2A0A0B4J237 113 aa16.9■□□□□ 0.3
LSM4-202ENST00000593564 CRXO43186 299 aaPredicted RBP16.9■□□□□ 0.3
LSM4-202ENST00000593564 INSP01308 110 aa16.9■□□□□ 0.3
LSM4-202ENST00000593564 HOXB5P09067 269 aa16.9■□□□□ 0.3
LSM4-202ENST00000593564 C15orf53Q8NAA6 179 aa16.9■□□□□ 0.3
LSM4-202ENST00000593564 STRAPQ9Y3F4 350 aaKnown RBP16.9■□□□□ 0.3
LSM4-202ENST00000593564 LYRM9A8MSI8 78 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 H3BP45 60 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 M0R2Z0 102 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 FAM3BP58499 235 aaPredicted RBP16.89■□□□□ 0.29
LSM4-202ENST00000593564 SPINK13Q1W4C9 94 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 IGFL4Q6B9Z1 124 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 TMEM144Q7Z5S9 345 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 V9GYH0 126 aa16.89■□□□□ 0.29
LSM4-202ENST00000593564 ZNF705GA8MUZ8 300 aaPredicted RBP16.88■□□□□ 0.29
LSM4-202ENST00000593564 H3BRN7 92 aa16.88■□□□□ 0.29
LSM4-202ENST00000593564 B2MP61769 119 aa16.88■□□□□ 0.29
LSM4-202ENST00000593564 C1orf134Q5TEV5 83 aa16.88■□□□□ 0.29
LSM4-202ENST00000593564 SHANK2-AS3Q9BTD1 123 aa16.88■□□□□ 0.29
LSM4-202ENST00000593564 NACAE9PAV3 2078 aa16.87■□□□□ 0.29
LSM4-202ENST00000593564 MUC4Q99102 2169 aa16.87■□□□□ 0.29
LSM4-202ENST00000593564 TSPOP30536 169 aa16.87■□□□□ 0.29
LSM4-202ENST00000593564 CYP2G1PQ6ZSU1 146 aa16.87■□□□□ 0.29
LSM4-202ENST00000593564 RNF182Q8N6D2 247 aa16.87■□□□□ 0.29
LSM4-202ENST00000593564 SLC25A39Q9BZJ4 359 aaPredicted RBP16.87■□□□□ 0.29
LSM4-202ENST00000593564 PRM2P04554 102 aa16.86■□□□□ 0.29
LSM4-202ENST00000593564 RPL7P18124 248 aaKnown RBP16.86■□□□□ 0.29
LSM4-202ENST00000593564 UBE2MP61081 183 aaKnown RBP16.86■□□□□ 0.29
LSM4-202ENST00000593564 ID3Q02535 119 aa16.86■□□□□ 0.29
LSM4-202ENST00000593564 FGL1Q08830 312 aa16.86■□□□□ 0.29
LSM4-202ENST00000593564 HIGD1AQ9Y241 93 aa16.86■□□□□ 0.29
LSM4-202ENST00000593564 IL5P05113 134 aa16.85■□□□□ 0.29
LSM4-202ENST00000593564 RAP2BP61225 183 aa16.85■□□□□ 0.29
LSM4-202ENST00000593564 BAP18Q8IXM2 172 aa16.85■□□□□ 0.29
LSM4-202ENST00000593564 ZNF738Q8NE65 137 aa16.85■□□□□ 0.29
LSM4-202ENST00000593564 SMCO3A2RU48 225 aa16.84■□□□□ 0.29
LSM4-202ENST00000593564 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
LSM4-202ENST00000593564 HYPMO75409 117 aa16.84■□□□□ 0.29
LSM4-202ENST00000593564 PLP1P60201 277 aa16.84■□□□□ 0.29
LSM4-202ENST00000593564 PLAC8L1A1L4L8 177 aa16.83■□□□□ 0.28
LSM4-202ENST00000593564 DEFB130BP0DP73 79 aa16.83■□□□□ 0.28
LSM4-202ENST00000593564 DEFB130AP0DP74 79 aa16.83■□□□□ 0.28
LSM4-202ENST00000593564 POLR2GP62487 172 aaKnown RBP eCLIP16.83■□□□□ 0.28
LSM4-202ENST00000593564 TRAV12-2A0A075B6T6 113 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 A0A087X0K7 114 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 PMS2P5A8MQ11 134 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 ADAP1O75689 374 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 LINC00869P0C866 280 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 SELENOTP62341 195 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 ZNF575Q86XF7 245 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 TMEM256Q8N2U0 113 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 ATG101Q9BSB4 218 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 PSENENQ9NZ42 101 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 HSPG2P98160 4391 aa16.82■□□□□ 0.28
LSM4-202ENST00000593564 C9orf170A2RU37 121 aa16.81■□□□□ 0.28
LSM4-202ENST00000593564 CXCL3P19876 107 aa16.81■□□□□ 0.28
LSM4-202ENST00000593564 AZU1P20160 251 aa16.81■□□□□ 0.28
LSM4-202ENST00000593564 S100A5P33763 92 aa16.81■□□□□ 0.28
LSM4-202ENST00000593564 S100A7AQ86SG5 101 aa16.81■□□□□ 0.28
LSM4-202ENST00000593564 OR8A1Q8NGG7 326 aa16.81■□□□□ 0.28
LSM4-202ENST00000593564 OR5G3P0C626 314 aa16.8■□□□□ 0.28
LSM4-202ENST00000593564 HIST1H1AQ02539 215 aaPredicted RBP16.8■□□□□ 0.28
LSM4-202ENST00000593564 CCDC190Q86UF4 302 aa16.8■□□□□ 0.28
LSM4-202ENST00000593564 SMIM8Q96KF7 97 aa16.8■□□□□ 0.28
LSM4-202ENST00000593564 UHRF2Q96PU4 802 aa16.8■□□□□ 0.28
LSM4-202ENST00000593564 LRP1BQ9NZR2 4599 aa16.8■□□□□ 0.28
LSM4-202ENST00000593564 F5H768 121 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 SSSCA1O60232 199 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 TAS2R60P59551 318 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 RHOBP62745 196 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 DLK1P80370 383 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 FCN2Q15485 313 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 PSG3Q16557 428 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 LINC01587Q99440 93 aa16.79■□□□□ 0.28
LSM4-202ENST00000593564 FNDC10F2Z333 226 aa16.78■□□□□ 0.28
LSM4-202ENST00000593564 K7EPK0 472 aa16.78■□□□□ 0.28
LSM4-202ENST00000593564 ATP5G1P05496 136 aa16.78■□□□□ 0.28
LSM4-202ENST00000593564 ATP5G3P48201 142 aa16.78■□□□□ 0.28
LSM4-202ENST00000593564 TMEM14EPQ6UXP3 125 aa16.78■□□□□ 0.28
LSM4-202ENST00000593564 ZNRF2Q8NHG8 242 aa16.78■□□□□ 0.28
LSM4-202ENST00000593564 PPP1R14DQ9NXH3 145 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms