RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-216	ENST00000592445		A0A0J9YY99	117 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	CFD	P00746	253 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	RHOB	P62745	196 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	SMCO1	Q147U7	214 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	SURF2	Q15527	256 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	GGNBP1	Q5YKI7	109 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	TMEM144	Q7Z5S9	345 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	LYPD1	Q8N2G4	141 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	ZNF738	Q8NE65	137 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	OR4D5	Q8NGN0	318 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	OR10J6P	Q8NGY7	276 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	RXFP4	Q8TDU9	374 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	IL22RA2	Q969J5	263 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	UPK3B	Q9BT76	320 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	PRR13	Q9NZ81	148 aa		13.59	□□□□□ -0.23
PRKCSH-216	ENST00000592445	M6PR	P20645	277 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	VBP1	P61758	197 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ESRG	Q1W209	222 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445		Q5VSD8	79 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ZNF503	Q96F45	646 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	GPR82	Q96P67	336 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	PAIP2B	Q9ULR5	123 aa	Known RBP	13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	SLC45A2	Q9UMX9	530 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	KCNIP3	Q9Y2W7	256 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	MYCBP2	O75592	4640 aa		13.58	□□□□□ -0.24
PRKCSH-216	ENST00000592445	TRAV8-2	A0A0B4J237	113 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	DISC1	C4P0D8	188 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ORM2	P19652	201 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	RAB11A	P62491	216 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	HIST1H1A	Q02539	215 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	C15orf40	Q8WUR7	153 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	FRZB	Q92765	325 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	PGPEP1	Q9NXJ5	209 aa		13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	MRPS16	Q9Y3D3	137 aa	Known RBP	13.57	□□□□□ -0.24
PRKCSH-216	ENST00000592445	VPS13B	Q7Z7G8	4022 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	IGKV1OR2-108	A0A075B7D4	117 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	EREG	O14944	169 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ADAP1	O75689	374 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	S100A7	P31151	101 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	FUS	P35637	526 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	LINC00315	P59091	139 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ZNF493	Q6ZR52	646 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	THAP8	Q8NA92	274 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	OR1S1	Q8NH92	325 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	AP3S1	Q92572	193 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	TMEM147	Q9BVK8	224 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	GPR132	Q9UNW8	380 aa		13.56	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ATP6V1G2	O95670	118 aa		13.55	□□□□□ -0.24
PRKCSH-216	ENST00000592445	LYZL2	Q7Z4W2	148 aa		13.55	□□□□□ -0.24
PRKCSH-216	ENST00000592445	BPIFC	Q8NFQ6	507 aa		13.55	□□□□□ -0.24
PRKCSH-216	ENST00000592445		A0A0B4J2A0	478 aa		13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	ZNF701	M0R085	212 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	AKR1C4	P17516	323 aa		13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	XG	P55808	180 aa		13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	OR8A1	Q8NGG7	326 aa		13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	RNASE8	Q8TDE3	154 aa	Known RBP	13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	TMEM263	Q8WUH6	116 aa	Known RBP	13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	SHPK	Q9UHJ6	478 aa		13.54	□□□□□ -0.24
PRKCSH-216	ENST00000592445	GATA2	P23769	480 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKCSH-216	ENST00000592445	FUNDC2	Q9BWH2	189 aa		13.53	□□□□□ -0.24
PRKCSH-216	ENST00000592445		A0A087WXM4	84 aa		13.52	□□□□□ -0.25
PRKCSH-216	ENST00000592445	IAPP	P10997	89 aa		13.52	□□□□□ -0.25
PRKCSH-216	ENST00000592445	HOXA5	P20719	270 aa		13.52	□□□□□ -0.25
PRKCSH-216	ENST00000592445	SSBP1	Q04837	148 aa	Known RBP	13.52	□□□□□ -0.25
PRKCSH-216	ENST00000592445	PRRT1	Q99946	306 aa		13.52	□□□□□ -0.25
PRKCSH-216	ENST00000592445	GAGE12B	A1L429	117 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445		H7BYZ3	331 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	GAGE7	O76087	117 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	GAGE12F	P0CL80	117 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	GAGE12G	P0CL81	117 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	GAGE12I	P0CL82	117 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	AKAIN1	P0CW23	69 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	CDKN1B	P46527	198 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	ERVFC1-1	P60608	527 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	CDPF1	Q6NVV7	123 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445		Q6ZRN7	208 aa	Predicted RBP	13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	CCDC28A	Q8IWP9	274 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445	LRRC20	Q8TCA0	184 aa		13.51	□□□□□ -0.25
PRKCSH-216	ENST00000592445		H3BNG1	76 aa		13.5	□□□□□ -0.25
PRKCSH-216	ENST00000592445	IFNA5	P01569	189 aa		13.5	□□□□□ -0.25
PRKCSH-216	ENST00000592445	RLN2	P04090	185 aa		13.5	□□□□□ -0.25
PRKCSH-216	ENST00000592445	PRB4	P10163	310 aa	Predicted RBP	13.5	□□□□□ -0.25
PRKCSH-216	ENST00000592445	LINC00612	Q8N6U2	182 aa		13.5	□□□□□ -0.25
PRKCSH-216	ENST00000592445	OR51S1	Q8NGJ8	323 aa		13.5	□□□□□ -0.25
PRKCSH-216	ENST00000592445	SRRM2	Q9UQ35	2752 aa	Known RBP	13.49	□□□□□ -0.25
PRKCSH-216	ENST00000592445	ANXA3	P12429	323 aa		13.49	□□□□□ -0.25
PRKCSH-216	ENST00000592445	RPL7	P18124	248 aa	Known RBP	13.49	□□□□□ -0.25
PRKCSH-216	ENST00000592445	SRPX	P78539	464 aa		13.49	□□□□□ -0.25
PRKCSH-216	ENST00000592445	AKR1C1	Q04828	323 aa		13.49	□□□□□ -0.25
PRKCSH-216	ENST00000592445	SNURFL	B1AK76	121 aa		13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445		H3BRN7	92 aa		13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	CXCL3	P19876	107 aa		13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	RAP2B	P61225	183 aa		13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	RPP30	P78346	268 aa	Known RBP	13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	MRPS10	P82664	201 aa	Known RBP	13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	PSG3	Q16557	428 aa		13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	SCGB3A2	Q96PL1	93 aa		13.48	□□□□□ -0.25
PRKCSH-216	ENST00000592445	SHANK2-AS3	Q9BTD1	123 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms