RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, human

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-223	ENST00000590215	SOCS3	O14543	225 aa		13.88	□□□□□ -0.19
MBD1-223	ENST00000590215	GALR1	P47211	349 aa		13.88	□□□□□ -0.19
MBD1-223	ENST00000590215	LEMD1	Q68G75	181 aa		13.88	□□□□□ -0.19
MBD1-223	ENST00000590215	APRG1	Q8IVJ8	170 aa		13.88	□□□□□ -0.19
MBD1-223	ENST00000590215	WFDC1	Q9HC57	220 aa		13.88	□□□□□ -0.19
MBD1-223	ENST00000590215	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	COX7A2P2	O60397	106 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	RPL7	P18124	248 aa	Known RBP	13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	DEFB131A	P59861	70 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	C10orf113	Q5VZT2	155 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215		Q6ZNX1	250 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	LINC00305	Q7Z4B0	112 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	OR1L4	Q8NGR5	311 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	PFDN5	Q99471	154 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	TM2D3	Q9BRN9	247 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	SMIM3	Q9BZL3	60 aa		13.87	□□□□□ -0.19
MBD1-223	ENST00000590215	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	MRPS12	O15235	138 aa	Known RBP	13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	MEOX2	P50222	304 aa		13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	ZNF124	Q15973	351 aa		13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	SAMD13	Q5VXD3	122 aa		13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	GATAD1	Q8WUU5	269 aa		13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	KCNIP2	Q9NS61	270 aa		13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	TNFSF18	Q9UNG2	199 aa		13.86	□□□□□ -0.19
MBD1-223	ENST00000590215	RNF222	A6NCQ9	220 aa		13.85	□□□□□ -0.19
MBD1-223	ENST00000590215	IFNA5	P01569	189 aa		13.85	□□□□□ -0.19
MBD1-223	ENST00000590215	ZNF688	P0C7X2	276 aa		13.85	□□□□□ -0.19
MBD1-223	ENST00000590215	SNRPD3	P62318	126 aa	Known RBP	13.85	□□□□□ -0.19
MBD1-223	ENST00000590215	RSG1	Q9BU20	258 aa		13.85	□□□□□ -0.19
MBD1-223	ENST00000590215	STAB2	Q8WWQ8	2551 aa		13.85	□□□□□ -0.19
MBD1-223	ENST00000590215	NBEAL2	Q6ZNJ1	2754 aa		13.85	□□□□□ -0.19
MBD1-223	ENST00000590215		A0A087X0K7	114 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	C17orf112	F2Z3M2	114 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	ISLR	O14498	428 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	PSMB3	P49720	205 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	MORN5	Q5VZ52	161 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	ZNF709	Q8N972	641 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	TENM3	Q9P273	2699 aa		13.84	□□□□□ -0.19
MBD1-223	ENST00000590215	FXYD6-FXYD2	A0A087WZ82	144 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	KIR2DL5B	A0A0G2JN68	375 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	KIR2DL5B	A0A0G2JPC4	375 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	ID1	P41134	155 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	PSMG4	Q5JS54	123 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	KIR2DL5A	Q8N109	375 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	KIR2DL5B	Q8NHK3	375 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	SCGB1C1	Q8TD33	95 aa		13.83	□□□□□ -0.2
MBD1-223	ENST00000590215	ZNF266	Q14584	549 aa		13.82	□□□□□ -0.2
MBD1-223	ENST00000590215	GCSAML	Q5JQS6	135 aa		13.82	□□□□□ -0.2
MBD1-223	ENST00000590215	BPIFA4P	Q86YQ2	179 aa		13.82	□□□□□ -0.2
MBD1-223	ENST00000590215	ATF4	P18848	351 aa	Predicted RBP	13.81	□□□□□ -0.2
MBD1-223	ENST00000590215	APOC4	P55056	127 aa		13.81	□□□□□ -0.2
MBD1-223	ENST00000590215	SPATA25	Q9BR10	227 aa		13.81	□□□□□ -0.2
MBD1-223	ENST00000590215	ZMAT4	Q9H898	229 aa		13.81	□□□□□ -0.2
MBD1-223	ENST00000590215	AGRN	O00468	2067 aa		13.81	□□□□□ -0.2
MBD1-223	ENST00000590215	SMLR1	H3BR10	107 aa		13.8	□□□□□ -0.2
MBD1-223	ENST00000590215	UBE2C	O00762	179 aa		13.8	□□□□□ -0.2
MBD1-223	ENST00000590215	CXCL2	P19875	107 aa		13.8	□□□□□ -0.2
MBD1-223	ENST00000590215	C16orf92	Q96LL3	132 aa		13.8	□□□□□ -0.2
MBD1-223	ENST00000590215	TIMM9	Q9Y5J7	89 aa		13.8	□□□□□ -0.2
MBD1-223	ENST00000590215		U3KQK5	164 aa		13.8	□□□□□ -0.2
MBD1-223	ENST00000590215	TRAV8-2	A0A0B4J237	113 aa		13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	TRAV5	A0A0B4J249	113 aa		13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	IGLC2	P0DOY2	106 aa		13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	RPL35A	P18077	110 aa	Known RBP	13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	TRPT1	Q86TN4	253 aa	Known RBP	13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	STH	Q8IWL8	128 aa		13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	HRH4	Q9H3N8	390 aa		13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	TMEM14C	Q9P0S9	112 aa		13.79	□□□□□ -0.2
MBD1-223	ENST00000590215	KNCN	A6PVL3	124 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	HMSD	A8MTL9	139 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	FFAR4	Q5NUL3	377 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	FAM78B	Q5VT40	261 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215		Q6ZWC4	215 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	ST6GAL2	Q96JF0	529 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	C20orf173	Q96LM9	149 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	LINC00052	Q96N35	136 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	RCHY1	Q96PM5	261 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	MRPL32	Q9BYC8	188 aa	Known RBP	13.78	□□□□□ -0.2
MBD1-223	ENST00000590215	CSTL1	Q9H114	145 aa		13.78	□□□□□ -0.2
MBD1-223	ENST00000590215		H3BMM0	161 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	ARPC5	O15511	151 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	HLA-DRB4	P13762	266 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	ACTL10	Q5JWF8	245 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	LCN15	Q6UWW0	184 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	FOXI2	Q6ZQN5	318 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	OR11H4	Q8NGC9	324 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	OR2G3	Q8NGZ4	309 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	FAM167A-AS1	Q96KT0	104 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	PSMG3	Q9BT73	122 aa	Predicted RBP	13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	MFF	Q9GZY8	342 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	SAV1	Q9H4B6	383 aa	Predicted RBP	13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	RFNG	Q9Y644	331 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215	HLA-DRB4	X5D2U9	266 aa		13.77	□□□□□ -0.21
MBD1-223	ENST00000590215		H3BQ15	152 aa		13.76	□□□□□ -0.21
MBD1-223	ENST00000590215	ZNF345	Q14585	488 aa		13.76	□□□□□ -0.21
MBD1-223	ENST00000590215	GUK1	Q16774	197 aa		13.76	□□□□□ -0.21
MBD1-223	ENST00000590215	SPATA31B1P	Q5VZV4	182 aa		13.76	□□□□□ -0.21
MBD1-223	ENST00000590215	SAT2	Q96F10	170 aa	Predicted RBP	13.76	□□□□□ -0.21

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