RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TCF24Q7RTU0 167 aa11.46□□□□□ -0.57
ATG4D-211ENST00000589753 OR2K2Q8NGT1 345 aa11.46□□□□□ -0.57
ATG4D-211ENST00000589753 GPR82Q96P67 336 aa11.46□□□□□ -0.57
ATG4D-211ENST00000589753 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
ATG4D-211ENST00000589753 FBN3Q75N90 2809 aa11.46□□□□□ -0.58
ATG4D-211ENST00000589753 ANK2Q01484 3957 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 TRAV5A0A0B4J249 113 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 UMAD1C9J7I0 102 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 WIPF1O43516 503 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 RPL11P62913 178 aaKnown RBP11.45□□□□□ -0.58
ATG4D-211ENST00000589753 OXLD1Q5BKU9 147 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 FAM90A2PQ658T7 463 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 RBPMS2Q6ZRY4 209 aaKnown RBP11.45□□□□□ -0.58
ATG4D-211ENST00000589753 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
ATG4D-211ENST00000589753 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
ATG4D-211ENST00000589753 TRAV25A0A0B4J276 109 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
ATG4D-211ENST00000589753 GALR1P47211 349 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 CDC34P49427 236 aaPredicted RBP11.44□□□□□ -0.58
ATG4D-211ENST00000589753 LCN12Q6JVE5 192 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 BPIFA4PQ86YQ2 179 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 TMEM61Q8N0U2 210 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 PHYHIPLQ96FC7 376 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 SLC25A2Q9BXI2 301 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
ATG4D-211ENST00000589753 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
ATG4D-211ENST00000589753 VWFP04275 2813 aa11.43□□□□□ -0.58
ATG4D-211ENST00000589753 TSPAN4O14817 238 aa11.43□□□□□ -0.58
ATG4D-211ENST00000589753 TAS2R45P59539 299 aa11.43□□□□□ -0.58
ATG4D-211ENST00000589753 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
ATG4D-211ENST00000589753 IGKV3-7A0A075B6H7 116 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 ZNF785A8K8V0 405 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 ATF4P18848 351 aaPredicted RBP11.42□□□□□ -0.58
ATG4D-211ENST00000589753 PAFAH1B2P68402 229 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 SAMD5Q5TGI4 173 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 ALKAL2Q6UX46 152 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 DPPA3Q6W0C5 159 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 STXBP6Q8NFX7 210 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 FAM167A-AS1Q96KT0 104 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 TMEM14CQ9P0S9 112 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 SMAD5-AS1Q9Y6J3 95 aa11.42□□□□□ -0.58
ATG4D-211ENST00000589753 CTXND1A0A1B0GTU2 59 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 G3V4G9 280 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 MRPS12O15235 138 aaKnown RBP11.41□□□□□ -0.58
ATG4D-211ENST00000589753 HMGB3O15347 200 aaKnown RBP11.41□□□□□ -0.58
ATG4D-211ENST00000589753 OR7C2O60412 319 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 EIF3GO75821 320 aaKnown RBP eCLIP11.41□□□□□ -0.58
ATG4D-211ENST00000589753 GP9P14770 177 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 FHITP49789 147 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 SULT1A2P50226 295 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 RAB5CP51148 216 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 GUCA2BQ16661 112 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 FAM213BQ8TBF2 198 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 SPAG8Q99932 426 aaPredicted RBP11.41□□□□□ -0.58
ATG4D-211ENST00000589753 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 OR51M1Q9H341 326 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 NRN1Q9NPD7 142 aa11.41□□□□□ -0.58
ATG4D-211ENST00000589753 A0A087X0K7 114 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
ATG4D-211ENST00000589753 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 PYYP10082 97 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 TFPI2P48307 235 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 SSX7Q7RTT5 188 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 PAXXQ9BUH6 204 aa11.4□□□□□ -0.58
ATG4D-211ENST00000589753 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 MEOX2P50222 304 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 EGFEM1PQ0D2K5 195 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 HRH4Q9H3N8 390 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 ZMAT5Q9UDW3 170 aaKnown RBP11.39□□□□□ -0.59
ATG4D-211ENST00000589753 TRRAPQ9Y4A5 3859 aa11.39□□□□□ -0.59
ATG4D-211ENST00000589753 MAP1LC3B2A6NCE7 125 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 H3BQ15 152 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 CXorf1O96002 111 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
ATG4D-211ENST00000589753 OR10J4P0C629 311 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 HIST1H1EP10412 219 aaKnown RBP11.38□□□□□ -0.59
ATG4D-211ENST00000589753 GUK1Q16774 197 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 LCN15Q6UWW0 184 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 DCANP1Q8TF63 244 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 RNF141Q8WVD5 230 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 FXYD5Q96DB9 178 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 MAP1LC3BQ9GZQ8 125 aa11.38□□□□□ -0.59
ATG4D-211ENST00000589753 ZNF256Q9Y2P7 627 aaPredicted RBP11.38□□□□□ -0.59
ATG4D-211ENST00000589753 H3BTX0 84 aa11.37□□□□□ -0.59
ATG4D-211ENST00000589753 K7EQG2 157 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms