RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PAX9P55771 341 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 ODF3L2Q3SX64 289 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 CLEC19AQ6UXS0 136 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 Q6ZRG5 221 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 TMEM144Q7Z5S9 345 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 TMEM116Q8NCL8 245 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 SCARB1Q8WTV0 552 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 Q8WTZ3 238 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 NPIPB3Q92617 1050 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
VPS25-204ENST00000589577 FANCD2OSQ96PS1 177 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 RARRES2Q99969 163 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 ZNF471Q9BX82 626 aaPredicted RBP4.41□□□□□ -1.7
VPS25-204ENST00000589577 SMIM3Q9BZL3 60 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 HRH4Q9H3N8 390 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 UBQLN2Q9UHD9 624 aa4.41□□□□□ -1.7
VPS25-204ENST00000589577 TMEM213A2RRL7 107 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 MFSD2BA6NFX1 497 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 I3L2K1 104 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 K7EIM0 57 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 BCL2L11O43521 198 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 TMEM50AO95807 157 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 IGHV3-23P01764 117 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 CLEC3BP05452 202 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 RD3LP0DJH9 198 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 TPT1P13693 172 aaKnown RBP4.4□□□□□ -1.71
VPS25-204ENST00000589577 HLA-DMBP28068 263 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 CAMLGP49069 296 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 KRTAP10-2P60368 255 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 NHLH2Q02577 135 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 GAMTQ14353 236 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 KLK9Q2XQG4 91 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 BTNL8Q6UX41 500 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 SPATA12Q7Z6I5 190 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 KCNRGQ8N5I3 272 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 Q8NAQ8 132 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 OR51G1Q8NGK1 321 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 OR11H2Q8NH07 326 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 ZNF502Q8TBZ5 544 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 GRAMD2BQ96HH9 432 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 TRGV9Q99603 122 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 TMEM231Q9H6L2 316 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 KLK9Q9UKQ9 250 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 S4R3C0 116 aa4.4□□□□□ -1.71
VPS25-204ENST00000589577 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.39□□□□□ -1.71
VPS25-204ENST00000589577 TRAV10A0A0B4J240 114 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 A0A1W2PS18 150 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 ZNF320A2RRD8 509 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 PPP5D1E7EU14 171 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 TEX46H3BTG2 121 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 J3QL48 77 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 NDUFA4O00483 81 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 AGPAT2O15120 278 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 COX7A2P2O60397 106 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 MBP02144 154 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 XGP55808 180 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 YPEL3P61236 119 aaPredicted RBP4.39□□□□□ -1.71
VPS25-204ENST00000589577 LYZP61626 148 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 B2MP61769 119 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 Q5BKY6 102 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 AKR1C8PQ5T2L2 129 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 C19orf35Q6ZS72 473 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 TMUB2Q71RG4 321 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 SLC51BQ86UW2 128 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 LYPD1Q8N2G4 141 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 HSD17B11Q8NBQ5 300 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 OR1L4Q8NGR5 311 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 METTL26Q96S19 204 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 PFDN5Q99471 154 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 RNF2Q99496 336 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 C20orf24Q9BUV8 137 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 PBDC1Q9BVG4 233 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 PARD6GQ9BYG4 376 aaPredicted RBP4.39□□□□□ -1.71
VPS25-204ENST00000589577 C11orf1Q9H5F2 150 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 FNDC4Q9H6D8 234 aaPredicted RBP4.39□□□□□ -1.71
VPS25-204ENST00000589577 WDR83OSQ9Y284 106 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 UFC1Q9Y3C8 167 aa4.39□□□□□ -1.71
VPS25-204ENST00000589577 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
VPS25-204ENST00000589577 ELOA3CA0A087WX78 387 aaPredicted RBP4.38□□□□□ -1.71
VPS25-204ENST00000589577 A0A1W2PPV4 95 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 A8MWP6 167 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 PRSS46E5RG02 174 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 TOMM40O96008 361 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 IL4P05112 153 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 CD5P06127 495 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 OR5G3P0C626 314 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 LINC00869P0C866 280 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 IGLC1P0CG04 106 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 RPL29P47914 159 aaKnown RBP4.38□□□□□ -1.71
VPS25-204ENST00000589577 TAS2R45P59539 299 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 RAB2AP61019 212 aa4.38□□□□□ -1.71
VPS25-204ENST00000589577 SERF2P84101 59 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms