RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NDUFA3O95167 84 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 CA1P00915 261 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-206ENST00000589117 MFAP4P55083 255 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 GNG5P63218 68 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 HBBP68871 147 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 KIAA1644Q3SXP7 199 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 MINOS1Q5TGZ0 78 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 CYB5R2Q6BCY4 276 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 ZNF562Q6V9R5 426 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 Q6ZWC4 215 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 NEU1Q99519 415 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 C2orf88Q9BSF0 95 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 C1RLQ9NZP8 487 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 TP53TG3Q9ULZ0 132 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 ZFP30Q9Y2G7 519 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 MINOS1-NBL1R4GNA1 71 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 PKDREJQ9NTG1 2253 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 M0R143 59 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 ZNF324O75467 553 aaPredicted RBP5.86□□□□□ -1.47
ZNF540-206ENST00000589117 HSBP1O75506 76 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 RAB4AP20338 218 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 DLX1P56177 255 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 KRTDAPP60985 99 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 SSTP61278 116 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 ADORA2A-AS1P86434 159 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 FHL3Q13643 280 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 C5orf64Q2M2E5 130 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 RBPMS2Q6ZRY4 209 aaKnown RBP5.86□□□□□ -1.47
ZNF540-206ENST00000589117 MRPL52Q86TS9 123 aaKnown RBP5.86□□□□□ -1.47
ZNF540-206ENST00000589117 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 VN1R17PQ8TDU5 208 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 FAM168AQ92567 244 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 SHANK2-AS3Q9BTD1 123 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 FAM103A1Q9BTL3 118 aaKnown RBP5.86□□□□□ -1.47
ZNF540-206ENST00000589117 AAMDCQ9H7C9 122 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 TBL2Q9Y4P3 447 aaKnown RBP5.86□□□□□ -1.47
ZNF540-206ENST00000589117 MUC6Q6W4X9 2439 aa5.86□□□□□ -1.47
ZNF540-206ENST00000589117 KIR2DL5BA0A0G2JN68 375 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 KIR2DL5BA0A0G2JPC4 375 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 TRBV6-1A0A0K0K1D8 114 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 SERTM2A0A1B0GWG4 89 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 A0A1W2PS18 150 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 NCBP2LA6PVI3 153 aaKnown RBP5.85□□□□□ -1.47
ZNF540-206ENST00000589117 NPIPB5A8MRT5 1133 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 DIRC3C9JPN6 131 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 OR2J3O76001 311 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 IGKV1-17P01599 117 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 SNRPCP09234 159 aaKnown RBP5.85□□□□□ -1.47
ZNF540-206ENST00000589117 CSN1S1P47710 185 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 CAMPP49913 170 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 LEMD1Q68G75 181 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 TEX43Q6ZNM6 134 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 KIR2DL5AQ8N109 375 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 ZNF48Q96MX3 618 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-206ENST00000589117 C20orf144Q9BQM9 153 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 PRSS22Q9GZN4 317 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 NRN1Q9NPD7 142 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 MALRD1Q5VYJ5 2156 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 POLEQ07864 2286 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 ATMQ13315 3056 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 TRBV19A0A075B6N1 114 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 ODF3BA8MYP8 253 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 K7EIM0 57 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 FRMD6-AS1P0C7T7 363 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 FAM106CPP0CH98 169 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 PMCHP20382 165 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 PRB3Q04118 309 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-206ENST00000589117 KLF5Q13887 457 aaPredicted RBP5.85□□□□□ -1.47
ZNF540-206ENST00000589117 PDE6HQ13956 83 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 C11orf71Q6IPW1 123 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 DTX2Q86UW9 622 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 OR2D3Q8NGH3 330 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 ARPC1AQ92747 370 aa5.85□□□□□ -1.47
ZNF540-206ENST00000589117 A0A1B0GW15 77 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 FBLL1A6NHQ2 334 aaKnown RBP5.84□□□□□ -1.47
ZNF540-206ENST00000589117 CHEK1O14757 476 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 IL4P05112 153 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 CT45A10P0DMU9 189 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 LINC00310P59036 64 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 PSG9Q00887 426 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 SLAQ13239 276 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 PMCHL1Q16048 86 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 Q6AWC8 147 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 VMO1Q7Z5L0 202 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 ARL6IP6Q8N6S5 226 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 KLHDC1Q8N7A1 406 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 C18orf32Q8TCD1 76 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 SGK494Q96LW2 274 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 MIEN1Q9BRT3 115 aa5.84□□□□□ -1.47
ZNF540-206ENST00000589117 ADGRG4Q8IZF6 3080 aa5.84□□□□□ -1.48
ZNF540-206ENST00000589117 C19orf71A6NCJ1 209 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 H3BRN7 92 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 NTF3P20783 257 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 FCGR2BP31994 310 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-206ENST00000589117 Q56UQ5 140 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 RUSC1-AS1Q66K80 236 aa5.83□□□□□ -1.48
ZNF540-206ENST00000589117 ZNF705AQ6ZN79 300 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-206ENST00000589117 PRNTQ86SH4 94 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms