RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 LCN12Q6JVE5 192 aa12.85□□□□□ -0.35
SCAMP4-211ENST00000588907 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
SCAMP4-211ENST00000588907 SLC25A22Q9H936 323 aa12.85□□□□□ -0.35
SCAMP4-211ENST00000588907 RPRMQ9NS64 109 aa12.85□□□□□ -0.35
SCAMP4-211ENST00000588907 IGHV3-49A0A0A0MS15 119 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 CTXND1A0A1B0GTU2 59 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 IGLV1-51P01701 117 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 APOHP02749 345 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 FAM122CQ6P4D5 195 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 ADAMTSL5Q6ZMM2 481 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 RBPMS2Q6ZRY4 209 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 TMEM14CQ9P0S9 112 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 MLXQ9UH92 298 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 RFNGQ9Y644 331 aa12.84□□□□□ -0.35
SCAMP4-211ENST00000588907 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 IFNA7P01567 189 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 SULT1A2P50226 295 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 TCF24Q7RTU0 167 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 RNF141Q8WVD5 230 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 VWFP04275 2813 aa12.83□□□□□ -0.36
SCAMP4-211ENST00000588907 CMYA5Q8N3K9 4069 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 TRAV2A0A0B4J234 112 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 IGHV3-66A0A0C4DH42 116 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 TEX46H3BTG2 121 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 TSPAN4O14817 238 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 GUK1Q16774 197 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 FAM90A2PQ658T7 463 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 TEX261Q6UWH6 196 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 MIR17HGQ75NE6 70 aa12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-211ENST00000588907 A0A087X0K7 114 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 OR7C2O60412 319 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 CXorf1O96002 111 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 STAG3L2P0CL84 134 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 STAG3L3P0CL85 134 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 EDN2P20800 178 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 CD300EQ496F6 205 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 ALKAL2Q6UX46 152 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 FAM213BQ8TBF2 198 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
SCAMP4-211ENST00000588907 GP9P14770 177 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 IGLL1P15814 213 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 PDE6HQ13956 83 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 FAM167A-AS1Q96KT0 104 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 PAXXQ9BUH6 204 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 OR51M1Q9H341 326 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 HRH4Q9H3N8 390 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
SCAMP4-211ENST00000588907 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 ZNF785A8K8V0 405 aa12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 HBE1P02100 147 aa12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 HIST1H1EP10412 219 aaKnown RBP12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 LCN15Q6UWW0 184 aa12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 SAT2Q96F10 170 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
SCAMP4-211ENST00000588907 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 TRAV5A0A0B4J249 113 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 MAP1LC3B2A6NCE7 125 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 ZNF705EA8MWA4 302 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 MRPS12O15235 138 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 ZNF253O75346 499 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 H2AFB1P0C5Y9 115 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 IGLC2P0DOY2 106 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 UBE2L3P68036 154 aaKnown RBP12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 ZNF680Q8NEM1 530 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 MBD3L1Q8WWY6 194 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 MAP1LC3BQ9GZQ8 125 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 MS4A6AQ9H2W1 248 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 CLEC5AQ9NY25 188 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 UBQLN2Q9UHD9 624 aa12.78□□□□□ -0.36
SCAMP4-211ENST00000588907 TRAV1-1A0A0B4J248 108 aa12.77□□□□□ -0.37
SCAMP4-211ENST00000588907 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.37
SCAMP4-211ENST00000588907 CMC4P56277 68 aaPredicted RBP12.77□□□□□ -0.37
SCAMP4-211ENST00000588907 ZNF726P1Q15940 193 aa12.77□□□□□ -0.37
SCAMP4-211ENST00000588907 SLC50A1Q9BRV3 221 aa12.77□□□□□ -0.37
SCAMP4-211ENST00000588907 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
SCAMP4-211ENST00000588907 ID1P41134 155 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 PSMB3P49720 205 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 FHITP49789 147 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 PPT1P50897 306 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 FAM74A1Q5RGS3 127 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 ZNF767PQ75MW2 155 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 SFT2D1Q8WV19 159 aa12.76□□□□□ -0.37
SCAMP4-211ENST00000588907 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms