RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 VMA21Q3ZAQ7 101 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 NEU1Q99519 415 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 MIEN1Q9BRT3 115 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 VAMP8Q9BV40 100 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 A0A1W2PPI3 338 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 TCAPO15273 167 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 KLF17Q5JT82 389 aaPredicted RBP11.59□□□□□ -0.55
CCDC43-203ENST00000588210 PVRIGQ6DKI7 326 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 Q8N976 141 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 VN1R17PQ8TDU5 208 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 TBL2Q9Y4P3 447 aaKnown RBP11.59□□□□□ -0.55
CCDC43-203ENST00000588210 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
CCDC43-203ENST00000588210 M0QZK8 103 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 SRIP30626 198 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 MC5RP33032 325 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 MYCNOSP40205 109 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 MRGPRG-AS1Q2M3A8 158 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 KIAA1644Q3SXP7 199 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 TDRG1Q3Y452 100 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 VMO1Q7Z5L0 202 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 NHLRC2Q8NBF2 726 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 LINC00479Q96M42 142 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 MRPL36Q9P0J6 103 aaKnown RBP11.58□□□□□ -0.56
CCDC43-203ENST00000588210 TRAV40A0A0B4J280 105 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 A0A1W2PS18 150 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 SLC25A17O43808 307 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 ZNF253O75346 499 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 APCSP02743 223 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 REG1AP05451 166 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 CRYGCP07315 174 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 AMTP48728 403 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 CHRDL1Q9BU40 450 aa11.58□□□□□ -0.56
CCDC43-203ENST00000588210 ZNF331Q9NQX6 463 aaPredicted RBP11.58□□□□□ -0.56
CCDC43-203ENST00000588210 CA1P00915 261 aaPredicted RBP11.57□□□□□ -0.56
CCDC43-203ENST00000588210 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 PRTN3P24158 256 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 ETFRF1Q6IPR1 90 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 ZNF705AQ6ZN79 300 aaPredicted RBP11.57□□□□□ -0.56
CCDC43-203ENST00000588210 C11orf42Q8N5U0 333 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 NRN1Q9NPD7 142 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 TPSG1Q9NRR2 321 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 PAM16Q9Y3D7 125 aa11.57□□□□□ -0.56
CCDC43-203ENST00000588210 NIPBLQ6KC79 2804 aaeCLIP11.57□□□□□ -0.56
CCDC43-203ENST00000588210 ZNF324O75467 553 aaPredicted RBP11.56□□□□□ -0.56
CCDC43-203ENST00000588210 RBP4P02753 201 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 LGALS7P47929 136 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 SMIM12Q96EX1 92 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 FAM103A1Q9BTL3 118 aaKnown RBP11.56□□□□□ -0.56
CCDC43-203ENST00000588210 MRPL27Q9P0M9 148 aaKnown RBP11.56□□□□□ -0.56
CCDC43-203ENST00000588210 CENPVL3A0A0U1RRI6 287 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 IGLC7A0M8Q6 106 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 KRTDAPP60985 99 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 NUDT10Q8NFP7 164 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 TNFRSF14Q92956 283 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 NUDT11Q96G61 164 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 TRGV9Q99603 122 aa11.56□□□□□ -0.56
CCDC43-203ENST00000588210 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 IGHV3-48P01763 117 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 IGHV1-8P0DP01 117 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 PMCHP20382 165 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 SLAQ13239 276 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 C9orf139Q6ZV77 190 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 TEX45Q8NA69 505 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 TMEM68Q96MH6 324 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 ATG101Q9BSB4 218 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 CUBNO60494 3623 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 TRAV34A0A0B4J273 112 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 HIST1H1EP10412 219 aaKnown RBP11.55□□□□□ -0.56
CCDC43-203ENST00000588210 NIT1Q86X76 327 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 C18orf32Q8TCD1 76 aa11.55□□□□□ -0.56
CCDC43-203ENST00000588210 IGHV1-69DA0A0B4J2H0 117 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 MOSP00540 346 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 IGHV1-69P01742 117 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 GNG5P63218 68 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 TSKUQ8WUA8 353 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 C22orf15Q8WYQ4 148 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 RITA1Q96K30 269 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 TMEM133Q9H2Q1 129 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 EPDR1Q9UM22 224 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 KLF12Q9Y4X4 402 aa11.54□□□□□ -0.56
CCDC43-203ENST00000588210 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
CCDC43-203ENST00000588210 OR2J3O76001 311 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 CRYGBP07316 175 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 CTRLP40313 264 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 RPL27AP46776 148 aaKnown RBP11.53□□□□□ -0.56
CCDC43-203ENST00000588210 UBE2E1P51965 193 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 MFAP2P55001 183 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 UBE2G1P62253 170 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 ATP5L2Q7Z4Y8 100 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms