RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 XKRY2A2RUG3 117 aa19.99■□□□□ 0.79
CAPNS1-204ENST00000587718 PYYP10082 97 aa19.99■□□□□ 0.79
CAPNS1-204ENST00000587718 ORM2P19652 201 aa19.99■□□□□ 0.79
CAPNS1-204ENST00000587718 RASL11BQ9BPW5 248 aa19.99■□□□□ 0.79
CAPNS1-204ENST00000587718 HILPDAQ9Y5L2 63 aa19.99■□□□□ 0.79
CAPNS1-204ENST00000587718 K7EIM0 57 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 MT-ND6P03923 174 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 GP9P14770 177 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 UBE2E1P51965 193 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 PRB3Q04118 309 aaPredicted RBP19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 KLRD1Q13241 179 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 TMEM183BQ1AE95 376 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 RBM14Q96PK6 669 aaKnown RBP19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 C1RLQ9NZP8 487 aa19.98■□□□□ 0.79
CAPNS1-204ENST00000587718 IGHV3-48P01763 117 aa19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 NBEAP1P0C6P0 100 aa19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 WDR73Q6P4I2 378 aa19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 LHFPL4Q7Z7J7 247 aa19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 TTC9CQ8N5M4 171 aa19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 MRPL27Q9P0M9 148 aaKnown RBP19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 EPDR1Q9UM22 224 aa19.97■□□□□ 0.79
CAPNS1-204ENST00000587718 PCP4L1A6NKN8 68 aa19.96■□□□□ 0.79
CAPNS1-204ENST00000587718 BCL6BQ8N143 479 aaPredicted RBP19.96■□□□□ 0.79
CAPNS1-204ENST00000587718 SIGLECL1Q8N7X8 197 aa19.96■□□□□ 0.79
CAPNS1-204ENST00000587718 C5orf17Q8NAS9 161 aa19.96■□□□□ 0.79
CAPNS1-204ENST00000587718 OR10D4PQ8NGN7 298 aa19.96■□□□□ 0.79
CAPNS1-204ENST00000587718 TMEM68Q96MH6 324 aa19.96■□□□□ 0.79
CAPNS1-204ENST00000587718 TOMM40O96008 361 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 PSG1P11464 419 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 KLK9Q2XQG4 91 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 HIST1H2BLQ99880 126 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 GNB1LQ9BYB4 327 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 KLK9Q9UKQ9 250 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 HIST1H1BP16401 226 aaKnown RBP19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 CX3CL1P78423 397 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 GFI1BQ5VTD9 330 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 ARPC1AQ92747 370 aa19.95■□□□□ 0.78
CAPNS1-204ENST00000587718 SCGB2A1O75556 95 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 IGKV1-17P01599 117 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 RD3LP0DJH9 198 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 HIST1H1EP10412 219 aaKnown RBP19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 HES1Q14469 280 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 PYY3Q5JQD4 70 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 IBA57Q5T440 356 aaKnown RBP19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 RUSC1-AS1Q66K80 236 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 RASL11AQ6T310 242 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 THYN1Q9P016 225 aa19.94■□□□□ 0.78
CAPNS1-204ENST00000587718 IGLV11-55A0A075B6I3 123 aa19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 TRBV6-1A0A0K0K1D8 114 aa19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 SMIM27A0A1W2PRY6 76 aa19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 BAGE2Q86Y30 109 aa19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 PACRGQ96M98 296 aaPredicted RBP19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 ATG101Q9BSB4 218 aa19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 OTORQ9NRC9 128 aa19.93■□□□□ 0.78
CAPNS1-204ENST00000587718 SLC17A3O00476 420 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 FAM106CPP0CH98 169 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 IGHV4-38-2P0DP08 117 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 BRS3P32247 399 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 OR5I1Q13606 314 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 C9orf139Q6ZV77 190 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 FMC1Q96HJ9 113 aa19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 SLC25A39Q9BZJ4 359 aaPredicted RBP19.92■□□□□ 0.78
CAPNS1-204ENST00000587718 TOX4O94842 621 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 FABP4P15090 132 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 FCGR2BP31994 310 aaPredicted RBP19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 MFAP4P55083 255 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 C19orf35Q6ZS72 473 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 LYPD1Q8N2G4 141 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 C3orf56Q8N813 242 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 SHANK2-AS3Q9BTD1 123 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 GSN-AS1Q9NRJ2 163 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 SLC25A5P05141 298 aaKnown RBP19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 UBE2G1P62253 170 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 TMEM18Q96B42 140 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 TXN2Q99757 166 aa19.91■□□□□ 0.78
CAPNS1-204ENST00000587718 WI2-2373I1.2A0A1W2PRP0 233 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 PGPA6NDG6 321 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 DNAJC9-AS1A6NH13 148 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 HLA-DRB1P01911 266 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 APELAP0DMC3 54 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 TMEM11P17152 192 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 S100A7P31151 101 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 LYZP61626 148 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 ZNF600Q6ZNG1 722 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 OR5R1Q8NH85 324 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 GPR82Q96P67 336 aa19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 SOX21Q9Y651 276 aaPredicted RBP19.9■□□□□ 0.78
CAPNS1-204ENST00000587718 H3BRN7 92 aa19.89■□□□□ 0.77
CAPNS1-204ENST00000587718 AMBPP02760 352 aa19.89■□□□□ 0.77
CAPNS1-204ENST00000587718 RANP62826 216 aaKnown RBP19.89■□□□□ 0.77
CAPNS1-204ENST00000587718 GRAMD2BQ96HH9 432 aa19.89■□□□□ 0.77
CAPNS1-204ENST00000587718 FANCD2OSQ96PS1 177 aa19.89■□□□□ 0.77
CAPNS1-204ENST00000587718 TBX15Q96SF7 602 aa19.89■□□□□ 0.77
CAPNS1-204ENST00000587718 MGST1P10620 155 aaKnown RBP19.88■□□□□ 0.77
CAPNS1-204ENST00000587718 WIPF2Q8TF74 440 aaPredicted RBP19.88■□□□□ 0.77
CAPNS1-204ENST00000587718 DUX5Q96PT3 197 aa19.88■□□□□ 0.77
CAPNS1-204ENST00000587718 ZNF492Q9P255 531 aa19.88■□□□□ 0.77
CAPNS1-204ENST00000587718 IGHV3OR16-10A0A075B7F0 116 aa19.87■□□□□ 0.77
CAPNS1-204ENST00000587718 IZUMO1RA6ND01 250 aa19.87■□□□□ 0.77
CAPNS1-204ENST00000587718 GATCO43716 136 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms