RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CNN1P51911 297 aaKnown RBP13.68□□□□□ -0.22
TRAF4-216ENST00000586813 TMEM182Q6ZP80 229 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-216ENST00000586813 GPR82Q96P67 336 aa13.68□□□□□ -0.22
TRAF4-216ENST00000586813 TMEM147Q9BVK8 224 aa13.68□□□□□ -0.22
TRAF4-216ENST00000586813 H3BMQ9 156 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 M0R2Z0 102 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 INSP01308 110 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 AP3S2P59780 193 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 AKR1C1Q04828 323 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 SPINK13Q1W4C9 94 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 TOMM5Q8N4H5 51 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 OR11H7Q8NGC8 314 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 MCFD2Q8NI22 146 aa13.67□□□□□ -0.22
TRAF4-216ENST00000586813 TRAV8-2A0A0B4J237 113 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 H3BP45 60 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 CRXO43186 299 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-216ENST00000586813 NOL3O60936 208 aaKnown RBP13.66□□□□□ -0.22
TRAF4-216ENST00000586813 DUSP14O95147 198 aaKnown RBP13.66□□□□□ -0.22
TRAF4-216ENST00000586813 SFT2D2O95562 160 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 S100A7P31151 101 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 PPP1R1AQ13522 171 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 SPANXN5Q5MJ07 72 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 C1orf134Q5TEV5 83 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 ACOT7LQ6ZUV0 252 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 RNF182Q8N6D2 247 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 C15orf53Q8NAA6 179 aa13.66□□□□□ -0.22
TRAF4-216ENST00000586813 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-216ENST00000586813 LYRM9A8MSI8 78 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 ZNF705GA8MUZ8 300 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-216ENST00000586813 PRM2P04554 102 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 PYDC2Q56P42 97 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 ZNF575Q86XF7 245 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 BAP18Q8IXM2 172 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 ABCA13Q86UQ4 5058 aa13.65□□□□□ -0.22
TRAF4-216ENST00000586813 H3BRN7 92 aa13.64□□□□□ -0.23
TRAF4-216ENST00000586813 HOXB5P09067 269 aa13.64□□□□□ -0.23
TRAF4-216ENST00000586813 FAM3BP58499 235 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-216ENST00000586813 STRAPQ9Y3F4 350 aaKnown RBP13.64□□□□□ -0.23
TRAF4-216ENST00000586813 V9GYH0 126 aa13.64□□□□□ -0.23
TRAF4-216ENST00000586813 TSPOP30536 169 aa13.63□□□□□ -0.23
TRAF4-216ENST00000586813 B2MP61769 119 aa13.63□□□□□ -0.23
TRAF4-216ENST00000586813 FGL1Q08830 312 aa13.63□□□□□ -0.23
TRAF4-216ENST00000586813 TMEM144Q7Z5S9 345 aa13.63□□□□□ -0.23
TRAF4-216ENST00000586813 ZNF738Q8NE65 137 aa13.63□□□□□ -0.23
TRAF4-216ENST00000586813 SHANK2-AS3Q9BTD1 123 aa13.63□□□□□ -0.23
TRAF4-216ENST00000586813 SLC25A39Q9BZJ4 359 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-216ENST00000586813 PLAC8L1A1L4L8 177 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 BOLA2-SMG1P6H3BVE0 249 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 DEFB130BP0DP73 79 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 DEFB130AP0DP74 79 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 DEDD2Q8WXF8 326 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 ATG101Q9BSB4 218 aa13.62□□□□□ -0.23
TRAF4-216ENST00000586813 TRAV12-2A0A075B6T6 113 aa13.61□□□□□ -0.23
TRAF4-216ENST00000586813 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
TRAF4-216ENST00000586813 IL5P05113 134 aa13.61□□□□□ -0.23
TRAF4-216ENST00000586813 RPL7P18124 248 aaKnown RBP13.61□□□□□ -0.23
TRAF4-216ENST00000586813 RAP2BP61225 183 aa13.61□□□□□ -0.23
TRAF4-216ENST00000586813 HIGD1AQ9Y241 93 aa13.61□□□□□ -0.23
TRAF4-216ENST00000586813 HSPG2P98160 4391 aa13.6□□□□□ -0.23
TRAF4-216ENST00000586813 AZU1P20160 251 aa13.6□□□□□ -0.23
TRAF4-216ENST00000586813 POLR2GP62487 172 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAF4-216ENST00000586813 UHRF2Q96PU4 802 aa13.6□□□□□ -0.23
TRAF4-216ENST00000586813 F5H768 121 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 HYPMO75409 117 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 ADAP1O75689 374 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 LINC00869P0C866 280 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 PLP1P60201 277 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 UBE2MP61081 183 aaKnown RBP13.59□□□□□ -0.23
TRAF4-216ENST00000586813 ID3Q02535 119 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 HIST1H1AQ02539 215 aaPredicted RBP13.59□□□□□ -0.23
TRAF4-216ENST00000586813 OR8A1Q8NGG7 326 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 PSENENQ9NZ42 101 aa13.59□□□□□ -0.23
TRAF4-216ENST00000586813 A0A087X0K7 114 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 PMS2P5A8MQ11 134 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 OR5G3P0C626 314 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 CXCL3P19876 107 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 SELENOTP62341 195 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 RHOBP62745 196 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 FCN2Q15485 313 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 TMEM256Q8N2U0 113 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 ZNRF2Q8NHG8 242 aa13.58□□□□□ -0.24
TRAF4-216ENST00000586813 SSSCA1O60232 199 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 NUDT3O95989 172 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 ATP5G1P05496 136 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 ATP5G3P48201 142 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 TAS2R60P59551 318 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 TNP2Q05952 138 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 LINC01587Q99440 93 aa13.57□□□□□ -0.24
TRAF4-216ENST00000586813 NBDYA0A0U1RRE5 68 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 C9orf170A2RU37 121 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 CCNKO75909 580 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 S100A5P33763 92 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 RRAS2P62070 204 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-216ENST00000586813 PSG3Q16557 428 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 C16orf74Q96GX8 76 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 KRTAP4-5Q9BYR2 181 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 PPP1R14DQ9NXH3 145 aa13.56□□□□□ -0.24
TRAF4-216ENST00000586813 CBY3A6NI87 242 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms