RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 TRAV25A0A0B4J276 109 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 H3BRN7 92 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 BUB3O43684 328 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 RPL7P18124 248 aaKnown RBP12.17□□□□□ -0.46
ATG4D-205ENST00000586477 MEOX2P50222 304 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 RAB5CP51148 216 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 SAMD13Q5VXD3 122 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 DPPA3Q6W0C5 159 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 OR8I2Q8N0Y5 310 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 OR10G4Q8NGN3 311 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 OR10G9Q8NGN4 311 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 OR10G7Q8NGN6 311 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 TMEM37Q8WXS4 190 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 SH3BGRL3Q9H299 93 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 DNAH7Q8WXX0 4024 aa12.17□□□□□ -0.46
ATG4D-205ENST00000586477 ZNF98A6NK75 572 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 GALR1P47211 349 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 PAFAH1B2P68402 229 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 LCN12Q6JVE5 192 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 C16orf54Q6UWD8 224 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 IL34Q6ZMJ4 242 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 RBPMS2Q6ZRY4 209 aaKnown RBP12.16□□□□□ -0.46
ATG4D-205ENST00000586477 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 FUT9Q9Y231 359 aa12.16□□□□□ -0.46
ATG4D-205ENST00000586477 KHDC3LQ587J8 217 aa12.15□□□□□ -0.46
ATG4D-205ENST00000586477 PATE2Q6UY27 113 aa12.15□□□□□ -0.46
ATG4D-205ENST00000586477 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
ATG4D-205ENST00000586477 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
ATG4D-205ENST00000586477 ACTR3CQ9C0K3 210 aaPredicted RBP12.15□□□□□ -0.46
ATG4D-205ENST00000586477 SLC25A22Q9H936 323 aa12.15□□□□□ -0.46
ATG4D-205ENST00000586477 KMT2CQ8NEZ4 4911 aaKnown RBP12.14□□□□□ -0.47
ATG4D-205ENST00000586477 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 CDC34P49427 236 aaPredicted RBP12.14□□□□□ -0.47
ATG4D-205ENST00000586477 RPL11P62913 178 aaKnown RBP12.14□□□□□ -0.47
ATG4D-205ENST00000586477 DEFB114Q30KQ6 69 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 SIGLEC15Q6ZMC9 328 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 TMED6Q8WW62 240 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 GLMPQ8WWB7 406 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 SCRT1Q9BWW7 348 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 MLXQ9UH92 298 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 STAB2Q8WWQ8 2551 aa12.14□□□□□ -0.47
ATG4D-205ENST00000586477 IGHV3-49A0A0A0MS15 119 aa12.13□□□□□ -0.47
ATG4D-205ENST00000586477 TCF24Q7RTU0 167 aa12.13□□□□□ -0.47
ATG4D-205ENST00000586477 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
ATG4D-205ENST00000586477 ZNF256Q9Y2P7 627 aaPredicted RBP12.13□□□□□ -0.47
ATG4D-205ENST00000586477 IGHV3OR16-13A0A075B7E8 117 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 IGHV3-74A0A0B4J1X5 117 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 TRAV2A0A0B4J234 112 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 IGHV3-66A0A0C4DH42 116 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 TEX46H3BTG2 121 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 TSPAN4O14817 238 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
ATG4D-205ENST00000586477 ATF4P18848 351 aaPredicted RBP12.12□□□□□ -0.47
ATG4D-205ENST00000586477 RAB2AP61019 212 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 GUK1Q16774 197 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 GCSAMLQ5JQS6 135 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 FAM122CQ6P4D5 195 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 ADAMTSL5Q6ZMM2 481 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 SEPSECSQ9HD40 501 aaKnown RBP12.12□□□□□ -0.47
ATG4D-205ENST00000586477 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 TMEM14CQ9P0S9 112 aa12.12□□□□□ -0.47
ATG4D-205ENST00000586477 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
ATG4D-205ENST00000586477 OR4C46A6NHA9 309 aa12.11□□□□□ -0.47
ATG4D-205ENST00000586477 CD300EQ496F6 205 aaPredicted RBP12.11□□□□□ -0.47
ATG4D-205ENST00000586477 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
ATG4D-205ENST00000586477 LRRC20Q8TCA0 184 aa12.11□□□□□ -0.47
ATG4D-205ENST00000586477 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
ATG4D-205ENST00000586477 NRN1Q9NPD7 142 aa12.11□□□□□ -0.47
ATG4D-205ENST00000586477 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
ATG4D-205ENST00000586477 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 DNASE2O00115 360 aaPredicted RBP12.1□□□□□ -0.47
ATG4D-205ENST00000586477 OR7C2O60412 319 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 IFNA7P01567 189 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 SULT1A2P50226 295 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 CMC4P56277 68 aaPredicted RBP12.1□□□□□ -0.47
ATG4D-205ENST00000586477 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 TMEM61Q8N0U2 210 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
ATG4D-205ENST00000586477 A0A087X0K7 114 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 CXorf1O96002 111 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 EDN2P20800 178 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 LCN15Q6UWW0 184 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 MIR17HGQ75NE6 70 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 HRH4Q9H3N8 390 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 CLEC5AQ9NY25 188 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 RFNGQ9Y644 331 aa12.09□□□□□ -0.47
ATG4D-205ENST00000586477 STAG3L2P0CL84 134 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 STAG3L3P0CL85 134 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
ATG4D-205ENST00000586477 ID1P41134 155 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 PDE6HQ13956 83 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 WWC2-AS2Q96NR7 200 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
ATG4D-205ENST00000586477 SLC25A2Q9BXI2 301 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms