RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 PATE2Q6UY27 113 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 SIGLEC15Q6ZMC9 328 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 GTSCR1Q86UQ5 136 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 BAP18Q8IXM2 172 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 TMEM37Q8WXS4 190 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 CYTL1Q9NRR1 136 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
UBBP4-201ENST00000583708 NOTCH1P46531 2555 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 A0A087X0K7 114 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 A0A1W2PPV4 95 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 G3V4G9 280 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
UBBP4-201ENST00000583708 SPP1P10451 314 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 RAB5CP51148 216 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 DPPA3Q6W0C5 159 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 TMEM61Q8N0U2 210 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 ZNF471Q9BX82 626 aaPredicted RBP7.01□□□□□ -1.29
UBBP4-201ENST00000583708 NRN1Q9NPD7 142 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 FUT9Q9Y231 359 aa7.01□□□□□ -1.29
UBBP4-201ENST00000583708 IGHV3OR16-8A0A075B7F1 116 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 A8MZ25 164 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 ISLRO14498 428 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 ZNF253O75346 499 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 HIST1H1EP10412 219 aaKnown RBP7□□□□□ -1.29
UBBP4-201ENST00000583708 SNRPD3P62318 126 aaKnown RBP7□□□□□ -1.29
UBBP4-201ENST00000583708 RPL11P62913 178 aaKnown RBP7□□□□□ -1.29
UBBP4-201ENST00000583708 PDE6HQ13956 83 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 GUCA2BQ16661 112 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 AKR1C8PQ5T2L2 129 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 FAM78BQ5VT40 261 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 SPATA31B1PQ5VZV4 182 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 PQLC2Q6ZP29 291 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 HSD17B11Q8NBQ5 300 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 OR10G4Q8NGN3 311 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 OR10G9Q8NGN4 311 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 OR10G7Q8NGN6 311 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 PHYHIPLQ96FC7 376 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 RSG1Q9BU20 258 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 ACTR3CQ9C0K3 210 aaPredicted RBP7□□□□□ -1.29
UBBP4-201ENST00000583708 MS4A6AQ9H2W1 248 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 HRH4Q9H3N8 390 aa7□□□□□ -1.29
UBBP4-201ENST00000583708 K7EQG2 157 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 ATF4P18848 351 aaPredicted RBP6.99□□□□□ -1.29
UBBP4-201ENST00000583708 PSMB3P49720 205 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 KHDC3LQ587J8 217 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 TMEM41BQ5BJD5 291 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 LCN15Q6UWW0 184 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 LYPD1Q8N2G4 141 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 C9orf62Q8N4C0 152 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 ARL6IP6Q8N6S5 226 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 SLC50A1Q9BRV3 221 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 SLC25A32Q9H2D1 315 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 DOK5Q9P104 306 aa6.99□□□□□ -1.29
UBBP4-201ENST00000583708 IGHV3OR16-13A0A075B7E8 117 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 IGHV3-49A0A0A0MS15 119 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 IGHV3-74A0A0B4J1X5 117 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
UBBP4-201ENST00000583708 DCANP1Q8TF63 244 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 UHRF2Q96PU4 802 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 SCRT1Q9BWW7 348 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 OR51M1Q9H341 326 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 SLC25A22Q9H936 323 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 PRELID1Q9Y255 219 aa6.98□□□□□ -1.29
UBBP4-201ENST00000583708 IGHV3-66A0A0C4DH42 116 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 CTXND1A0A1B0GTU2 59 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 IZUMO1RA6ND01 250 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 TEX46H3BTG2 121 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 CXorf1O96002 111 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 IGLC2P0DOY2 106 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 CDC34P49427 236 aaPredicted RBP6.97□□□□□ -1.29
UBBP4-201ENST00000583708 KRTAP10-11P60412 298 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 PSG9Q00887 426 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 RPP25LQ8N5L8 163 aaKnown RBP6.97□□□□□ -1.29
UBBP4-201ENST00000583708 LRRC20Q8TCA0 184 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 MRPL53Q96EL3 112 aaKnown RBP6.97□□□□□ -1.29
UBBP4-201ENST00000583708 FAM167A-AS1Q96KT0 104 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 CLUHP3Q96NS8 147 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 NKX6-2Q9C056 277 aaPredicted RBP6.97□□□□□ -1.29
UBBP4-201ENST00000583708 TMEM167BQ9NRX6 74 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 RPRMQ9NS64 109 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 SMAD5-AS1Q9Y6J3 95 aa6.97□□□□□ -1.29
UBBP4-201ENST00000583708 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 NBEAP1P0C6P0 100 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 STAG3L2P0CL84 134 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 STAG3L3P0CL85 134 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 EDN2P20800 178 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 PPT1P50897 306 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 CD81P60033 236 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 GCSAMLQ5JQS6 135 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 Q8N1Y9 231 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 SUN5Q8TC36 379 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 RNF141Q8WVD5 230 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 RAB24Q969Q5 203 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 C16orf92Q96LL3 132 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 PAXXQ9BUH6 204 aa6.96□□□□□ -1.3
UBBP4-201ENST00000583708 TRBV19A0A075B6N1 114 aa6.95□□□□□ -1.3
UBBP4-201ENST00000583708 TRAV1-1A0A0B4J248 108 aa6.95□□□□□ -1.3
UBBP4-201ENST00000583708 SOCS3O14543 225 aa6.95□□□□□ -1.3
UBBP4-201ENST00000583708 OR7C2O60412 319 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms