RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-222	ENST00000582050	FAM122C	Q6P4D5	195 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	BPIFA4P	Q86YQ2	179 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	STXBP6	Q8NFX7	210 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	OR2K2	Q8NGT1	345 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	GLMP	Q8WWB7	406 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	MLX	Q9UH92	298 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	NOTCH3	Q9UM47	2321 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	PKD1L1	Q8TDX9	2849 aa		13.58	□□□□□ -0.24
EIF4A1-222	ENST00000582050	IGHV3-66	A0A0C4DH42	116 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	IGLV1-51	P01701	117 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	GALR1	P47211	349 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	SULT1A2	P50226	295 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	DEFB114	Q30KQ6	69 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	MORN5	Q5VZ52	161 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	SIGLEC15	Q6ZMC9	328 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	MIR17HG	Q75NE6	70 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	PLA2G2E	Q9NZK7	142 aa		13.57	□□□□□ -0.24
EIF4A1-222	ENST00000582050	TRAV25	A0A0B4J276	109 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	CTXND1	A0A1B0GTU2	59 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	WIPF1	O43516	503 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	KHDC3L	Q587J8	217 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	SPATA31B1P	Q5VZV4	182 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	FAM90A2P	Q658T7	463 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	LEMD1	Q68G75	181 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	TEX261	Q6UWH6	196 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	ALKAL2	Q6UX46	152 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	TCF24	Q7RTU0	167 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	RNF141	Q8WVD5	230 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	RAB24	Q969Q5	203 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	TMEM14C	Q9P0S9	112 aa		13.56	□□□□□ -0.24
EIF4A1-222	ENST00000582050	TRAV5	A0A0B4J249	113 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	IFNA7	P01567	189 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	STAG3L2	P0CL84	134 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	STAG3L3	P0CL85	134 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	PQLC2	Q6ZP29	291 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	FAM167A-AS1	Q96KT0	104 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	SLC25A2	Q9BXI2	301 aa		13.55	□□□□□ -0.24
EIF4A1-222	ENST00000582050	MEOX2	P50222	304 aa		13.54	□□□□□ -0.24
EIF4A1-222	ENST00000582050	RPL11	P62913	178 aa	Known RBP	13.54	□□□□□ -0.24
EIF4A1-222	ENST00000582050	CD300E	Q496F6	205 aa	Predicted RBP	13.54	□□□□□ -0.24
EIF4A1-222	ENST00000582050	LCN12	Q6JVE5	192 aa		13.54	□□□□□ -0.24
EIF4A1-222	ENST00000582050	FAM213B	Q8TBF2	198 aa		13.54	□□□□□ -0.24
EIF4A1-222	ENST00000582050	OR51M1	Q9H341	326 aa		13.54	□□□□□ -0.24
EIF4A1-222	ENST00000582050	TSPAN4	O14817	238 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	IGLL1	P15814	213 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	FHIT	P49789	147 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	PAFAH1B2	P68402	229 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	ZNF726P1	Q15940	193 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	ZNF680	Q8NEM1	530 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	LRRC20	Q8TCA0	184 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	MBD3L1	Q8WWY6	194 aa		13.53	□□□□□ -0.24
EIF4A1-222	ENST00000582050	ZNF785	A8K8V0	405 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	MRPS12	O15235	138 aa	Known RBP	13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	OR7C2	O60412	319 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	CXorf1	O96002	111 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	H2AFB1	P0C5Y9	115 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	HIST1H1E	P10412	219 aa	Known RBP	13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	GP9	P14770	177 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	ATF4	P18848	351 aa	Predicted RBP	13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	GUK1	Q16774	197 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	FAM74A1	Q5RGS3	127 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SAMD13	Q5VXD3	122 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	TMEM61	Q8N0U2	210 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	PAXX	Q9BUH6	204 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	HRH4	Q9H3N8	390 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	NRN1	Q9NPD7	142 aa		13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050	ZMAT5	Q9UDW3	170 aa	Known RBP	13.52	□□□□□ -0.25
EIF4A1-222	ENST00000582050		A0A087X0K7	114 aa		13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	TRAV2	A0A0B4J234	112 aa		13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	MAP1LC3B2	A6NCE7	125 aa		13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	IGLC2	P0DOY2	106 aa		13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SAT2	Q96F10	170 aa	Predicted RBP	13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SPAG8	Q99932	426 aa	Predicted RBP	13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	MAP1LC3B	Q9GZQ8	125 aa		13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SMAD5-AS1	Q9Y6J3	95 aa		13.51	□□□□□ -0.25
EIF4A1-222	ENST00000582050	TEX46	H3BTG2	121 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	DNASE2	O00115	360 aa	Predicted RBP	13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	HMGB3	O15347	200 aa	Known RBP	13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	ARL14EPL	P0DKL9	152 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	BLOC1S1	P78537	153 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	LCN15	Q6UWW0	184 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SSX7	Q7RTT5	188 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SFT2D1	Q8WV19	159 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	ZNF503	Q96F45	646 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	MS4A6A	Q9H2W1	248 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	UBQLN2	Q9UHD9	624 aa		13.5	□□□□□ -0.25
EIF4A1-222	ENST00000582050	TRAV1-1	A0A0B4J248	108 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	EIF3G	O75821	320 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	HBE1	P02100	147 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	NBEAP1	P0C6P0	100 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	PYY	P10082	97 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	UBE2L3	P68036	154 aa	Known RBP	13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	PDE6H	Q13956	83 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	FXYD5	Q96DB9	178 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	TMEM167B	Q9NRX6	74 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	SELENOK	Q9Y6D0	94 aa		13.49	□□□□□ -0.25
EIF4A1-222	ENST00000582050	IZUMO1R	A6ND01	250 aa		13.48	□□□□□ -0.25
EIF4A1-222	ENST00000582050	OR4C46	A6NHA9	309 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms