RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
CASC3-207ENST00000581849 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.04■□□□□ 0.16
CASC3-207ENST00000581849 SHANK2-AS3Q9BTD1 123 aa16.04■□□□□ 0.16
CASC3-207ENST00000581849 SLC25A39Q9BZJ4 359 aaPredicted RBP16.04■□□□□ 0.16
CASC3-207ENST00000581849 NPVFQ9HCQ7 196 aa16.04■□□□□ 0.16
CASC3-207ENST00000581849 RNF24Q9Y225 148 aa16.04■□□□□ 0.16
CASC3-207ENST00000581849 GOLT1BQ9Y3E0 138 aa16.04■□□□□ 0.16
CASC3-207ENST00000581849 DEFB131BA0A096LNP1 70 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 HYPMO75409 117 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 SPART-AS1P0CW21 52 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 RPL7P18124 248 aaKnown RBP16.03■□□□□ 0.16
CASC3-207ENST00000581849 ZBTB8BQ8NAP8 495 aaPredicted RBP16.03■□□□□ 0.16
CASC3-207ENST00000581849 OR10P1Q8NGE3 313 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 C20orf173Q96LM9 149 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 SLC35B3Q9H1N7 401 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 MGAT4CQ9UBM8 478 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 HIGD1AQ9Y241 93 aa16.03■□□□□ 0.16
CASC3-207ENST00000581849 DNAH10Q8IVF4 4471 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 F6UB75 175 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 LINC00869P0C866 280 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 FXYD7P58549 80 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 PRR20EP86478 221 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 PRR20CP86479 221 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 PRR20DP86480 221 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 PRR20BP86481 221 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 PRR20AP86496 221 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 GGACTQ9BVM4 153 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 SCRT1Q9BWW7 348 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 C20orf85Q9H1P6 137 aa16.02■□□□□ 0.16
CASC3-207ENST00000581849 FRAS1Q86XX4 4008 aa16.02■□□□□ 0.15
CASC3-207ENST00000581849 DUSP14O95147 198 aaKnown RBP16.01■□□□□ 0.15
CASC3-207ENST00000581849 METTL15P1P0C7V9 234 aa16.01■□□□□ 0.15
CASC3-207ENST00000581849 PXDC1Q5TGL8 231 aa16.01■□□□□ 0.15
CASC3-207ENST00000581849 TEPPQ6URK8 271 aa16.01■□□□□ 0.15
CASC3-207ENST00000581849 RCL1Q9Y2P8 373 aaKnown RBP16.01■□□□□ 0.15
CASC3-207ENST00000581849 A0A087X0K7 114 aa16■□□□□ 0.15
CASC3-207ENST00000581849 PLA2G10O15496 165 aa16■□□□□ 0.15
CASC3-207ENST00000581849 LYRM1O43325 122 aa16■□□□□ 0.15
CASC3-207ENST00000581849 SCGB1D2O95969 90 aa16■□□□□ 0.15
CASC3-207ENST00000581849 AMTNQ6UX39 209 aa16■□□□□ 0.15
CASC3-207ENST00000581849 IGHV3OR16-12A0A075B7B8 117 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 TRAV8-2A0A0B4J237 113 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 CCNKO75909 580 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 HBE1P02100 147 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 RRAS2P62070 204 aaPredicted RBP15.99■□□□□ 0.15
CASC3-207ENST00000581849 C1orf158Q8N1D5 194 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 IGF2BP2-AS1Q96M15 143 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 GSKIPQ9P0R6 139 aa15.99■□□□□ 0.15
CASC3-207ENST00000581849 OR5G3P0C626 314 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 OXA1LQ15070 435 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 ZNF767PQ75MW2 155 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 ZNF546Q86UE3 836 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 FAM210BQ96KR6 192 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 NDUFAF3Q9BU61 184 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 DKK2Q9UBU2 259 aa15.98■□□□□ 0.15
CASC3-207ENST00000581849 C7orf66A4D0T2 115 aa15.97■□□□□ 0.15
CASC3-207ENST00000581849 MBPP02686 304 aaPredicted RBP15.97■□□□□ 0.15
CASC3-207ENST00000581849 TCRBP04435 133 aa15.97■□□□□ 0.15
CASC3-207ENST00000581849 CNN1P51911 297 aaKnown RBP15.97■□□□□ 0.15
CASC3-207ENST00000581849 ZNF846Q147U1 533 aa15.97■□□□□ 0.15
CASC3-207ENST00000581849 GSG1LQ6UXU4 331 aa15.97■□□□□ 0.15
CASC3-207ENST00000581849 CCDC32Q9BV29 185 aa15.97■□□□□ 0.15
CASC3-207ENST00000581849 EMP1P54849 157 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 B2MP61769 119 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 RRN3P1Q2M238 152 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 LINC00299Q6ZSB3 139 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 OR11H7Q8NGC8 314 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 NIPSNAP3BQ9BS92 247 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 ARL6Q9H0F7 186 aa15.96■□□□□ 0.15
CASC3-207ENST00000581849 LOC102723971A0A1B0GUV8 181 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 P0DMU3 169 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 FAM231AP0DMU4 169 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 FAM231CP0DMU5 169 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 CXCL2P19875 107 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 FGL1Q08830 312 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 SLC38A11Q08AI6 406 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 FAM222AQ5U5X8 452 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 ZNF431Q8TF32 576 aaPredicted RBP15.95■□□□□ 0.14
CASC3-207ENST00000581849 UHRF2Q96PU4 802 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 ARV1Q9H2C2 271 aa15.95■□□□□ 0.14
CASC3-207ENST00000581849 L7N2F9 121 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 GOSR2O14653 212 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 INSP01308 110 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 CXCL3P19876 107 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 VAMP2P63027 116 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 PATE2Q6UY27 113 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 ZNF738Q8NE65 137 aa15.94■□□□□ 0.14
CASC3-207ENST00000581849 AGPAT2O15120 278 aa15.93■□□□□ 0.14
CASC3-207ENST00000581849 MRPS12O15235 138 aaKnown RBP15.93■□□□□ 0.14
CASC3-207ENST00000581849 ARL16Q0P5N6 197 aa15.93■□□□□ 0.14
CASC3-207ENST00000581849 IGFL4Q6B9Z1 124 aa15.93■□□□□ 0.14
CASC3-207ENST00000581849 RNF182Q8N6D2 247 aa15.93■□□□□ 0.14
CASC3-207ENST00000581849 TMEM208Q9BTX3 173 aa15.93■□□□□ 0.14
CASC3-207ENST00000581849 NUDT15Q9NV35 164 aa15.93■□□□□ 0.14
CASC3-207ENST00000581849 YTHDF2Q9Y5A9 579 aaKnown RBP15.93■□□□□ 0.14
CASC3-207ENST00000581849 CCSO14618 274 aa15.92■□□□□ 0.14
CASC3-207ENST00000581849 CRXO43186 299 aaPredicted RBP15.92■□□□□ 0.14
CASC3-207ENST00000581849 POM121L12Q8N7R1 296 aa15.92■□□□□ 0.14
CASC3-207ENST00000581849 OR8A1Q8NGG7 326 aa15.92■□□□□ 0.14
CASC3-207ENST00000581849 TRAV6A0A075B6T7 132 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms