RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ST8SIA2Q92186 375 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 MLXQ9UH92 298 aa7.86□□□□□ -1.15
CCDC47-203ENST00000580986 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 TSPAN4O14817 238 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 RPL7P18124 248 aaKnown RBP7.85□□□□□ -1.15
CCDC47-203ENST00000580986 MEOX2P50222 304 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 FFAR4Q5NUL3 377 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 SAMD13Q5VXD3 122 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 LINC00305Q7Z4B0 112 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 PHYHIPLQ96FC7 376 aa7.85□□□□□ -1.15
CCDC47-203ENST00000580986 SPAG8Q99932 426 aaPredicted RBP7.85□□□□□ -1.15
CCDC47-203ENST00000580986 ZNF207O43670 478 aaKnown RBP7.84□□□□□ -1.15
CCDC47-203ENST00000580986 APOHP02749 345 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-203ENST00000580986 IGLL1P15814 213 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 RHOBP62745 196 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 CD300EQ496F6 205 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-203ENST00000580986 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-203ENST00000580986 STXBP6Q8NFX7 210 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 UHRF2Q96PU4 802 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 SH3BGRL3Q9H299 93 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 SLC25A32Q9H2D1 315 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 SEPSECSQ9HD40 501 aaKnown RBP7.84□□□□□ -1.15
CCDC47-203ENST00000580986 DOK5Q9P104 306 aa7.84□□□□□ -1.15
CCDC47-203ENST00000580986 A0A087X0K7 114 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 EDN2P20800 178 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 GALR1P47211 349 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 RAB5CP51148 216 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 TAS2R45P59539 299 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 PAFAH1B2P68402 229 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 TMEM41BQ5BJD5 291 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 FAM78BQ5VT40 261 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 DPPA3Q6W0C5 159 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 SIGLEC15Q6ZMC9 328 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 TCF24Q7RTU0 167 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 TMEM61Q8N0U2 210 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 OR8I2Q8N0Y5 310 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 KRTAP4-12Q9BQ66 201 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 FAM110AQ9BQ89 295 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 SCRT1Q9BWW7 348 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 FUT9Q9Y231 359 aa7.83□□□□□ -1.16
CCDC47-203ENST00000580986 BOLA2-SMG1P6H3BVE0 249 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 MRPS12O15235 138 aaKnown RBP7.82□□□□□ -1.16
CCDC47-203ENST00000580986 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
CCDC47-203ENST00000580986 GUK1Q16774 197 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 GCSAMLQ5JQS6 135 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 AKR1C8PQ5T2L2 129 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 RBPMS2Q6ZRY4 209 aaKnown RBP7.82□□□□□ -1.16
CCDC47-203ENST00000580986 RPP25LQ8N5L8 163 aaKnown RBP7.82□□□□□ -1.16
CCDC47-203ENST00000580986 OR10G4Q8NGN3 311 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 OR10G9Q8NGN4 311 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 OR10G7Q8NGN6 311 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 NRN1Q9NPD7 142 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 RPRMQ9NS64 109 aa7.82□□□□□ -1.16
CCDC47-203ENST00000580986 MGAM2Q2M2H8 2515 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 IGHV3-49A0A0A0MS15 119 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 A0A1W2PPV4 95 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 OR4C46A6NHA9 309 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 ZNF253O75346 499 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 IGLC2P0DOY2 106 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 GP9P14770 177 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 CDC34P49427 236 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-203ENST00000580986 RAB2AP61019 212 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 PDE6HQ13956 83 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 BEAN1Q3B7T3 259 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 MORN5Q5VZ52 161 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 DCANP1Q8TF63 244 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 FAM167A-AS1Q96KT0 104 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 ACTR3CQ9C0K3 210 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-203ENST00000580986 HRH4Q9H3N8 390 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 SLC25A22Q9H936 323 aa7.81□□□□□ -1.16
CCDC47-203ENST00000580986 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
CCDC47-203ENST00000580986 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 CMYA5Q8N3K9 4069 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 IGHV3OR16-13A0A075B7E8 117 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 IGHV3-74A0A0B4J1X5 117 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 IGHV3-66A0A0C4DH42 116 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 CTXND1A0A1B0GTU2 59 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 ZNF785A8K8V0 405 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 STAG3L2P0CL84 134 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 STAG3L3P0CL85 134 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 SULT1A2P50226 295 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 CMC4P56277 68 aaPredicted RBP7.8□□□□□ -1.16
CCDC47-203ENST00000580986 LCN15Q6UWW0 184 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 TMED6Q8WW62 240 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 SLC25A2Q9BXI2 301 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 MS4A6AQ9H2W1 248 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 CLEC5AQ9NY25 188 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 RFNGQ9Y644 331 aa7.8□□□□□ -1.16
CCDC47-203ENST00000580986 IZUMO1RA6ND01 250 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 G3V4G9 280 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 K7EQG2 157 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 ISLRO14498 428 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 SOCS3O14543 225 aa7.79□□□□□ -1.16
CCDC47-203ENST00000580986 HIST1H1EP10412 219 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms