RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 CACFD1Q9UGQ2 172 aa13.17□□□□□ -0.3
NDEL1-209ENST00000580738 MRPS16Q9Y3D3 137 aaKnown RBP13.17□□□□□ -0.3
NDEL1-209ENST00000580738 CRYM-AS1A6NIL9 109 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 FAM25AB3EWG3 89 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 FAM25CB3EWG5 89 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 FAM25GB3EWG6 89 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 ZNF701M0R085 212 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-209ENST00000580738 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-209ENST00000580738 ZNF182P17025 639 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-209ENST00000580738 HOXA5P20719 270 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 STEAP1BQ6NZ63 245 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 TMEM144Q7Z5S9 345 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 TMEM256Q8N2U0 113 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 TMEM229BQ8NBD8 167 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
NDEL1-209ENST00000580738 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
NDEL1-209ENST00000580738 TAS2R19P59542 299 aa13.15□□□□□ -0.3
NDEL1-209ENST00000580738 NCS1P62166 190 aa13.15□□□□□ -0.3
NDEL1-209ENST00000580738 RNASE8Q8TDE3 154 aaKnown RBP13.15□□□□□ -0.3
NDEL1-209ENST00000580738 PTTG2Q9NZH5 202 aa13.15□□□□□ -0.3
NDEL1-209ENST00000580738 GATA2P23769 480 aaPredicted RBP13.14□□□□□ -0.31
NDEL1-209ENST00000580738 KRTAP10-1P60331 282 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 RHOBP62745 196 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
NDEL1-209ENST00000580738 FGL1Q08830 312 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 ZNF738Q8NE65 137 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 OR4D5Q8NGN0 318 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 OR1B1Q8NGR6 318 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 OR10J6PQ8NGY7 276 aa13.14□□□□□ -0.31
NDEL1-209ENST00000580738 ORM2P19652 201 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 CCR6P51684 374 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 ATP5IP56385 69 aaPredicted RBP13.13□□□□□ -0.31
NDEL1-209ENST00000580738 VBP1P61758 197 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
NDEL1-209ENST00000580738 ZNF493Q6ZR52 646 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 LINC00612Q8N6U2 182 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 THAP8Q8NA92 274 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 C18orf15Q96N68 181 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 SLC45A2Q9UMX9 530 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
NDEL1-209ENST00000580738 SURF2Q15527 256 aaPredicted RBP13.12□□□□□ -0.31
NDEL1-209ENST00000580738 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 TMEM263Q8WUH6 116 aaKnown RBP13.12□□□□□ -0.31
NDEL1-209ENST00000580738 IL22RA2Q969J5 263 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 PPP1R14DQ9NXH3 145 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 EXTL2Q9UBQ6 330 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
NDEL1-209ENST00000580738 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 GAGE7O76087 117 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 GAGE12FP0CL80 117 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 GAGE12GP0CL81 117 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 GAGE12IP0CL82 117 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 CDPF1Q6NVV7 123 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 GPR82Q96P67 336 aa13.11□□□□□ -0.31
NDEL1-209ENST00000580738 H3BNG1 76 aa13.1□□□□□ -0.31
NDEL1-209ENST00000580738 EREGO14944 169 aa13.1□□□□□ -0.31
NDEL1-209ENST00000580738 CFDP00746 253 aaPredicted RBP13.1□□□□□ -0.31
NDEL1-209ENST00000580738 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
NDEL1-209ENST00000580738 KIR3DS1Q14943 382 aa13.1□□□□□ -0.31
NDEL1-209ENST00000580738 PAIP2BQ9ULR5 123 aaKnown RBP13.1□□□□□ -0.31
NDEL1-209ENST00000580738 A0A0B4J2A0 478 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 DNAH10OSP0CZ25 163 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 IAPPP10997 89 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 CXCL3P19876 107 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 OR1S1Q8NH92 325 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 SHPKQ9UHJ6 478 aa13.09□□□□□ -0.31
NDEL1-209ENST00000580738 H7BYZ3 331 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 ADAP1O75689 374 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 CDKN1BP46527 198 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 RAB11AP62491 216 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 BPIFCQ8NFQ6 507 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 FUNDC2Q9BWH2 189 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 KCNIP3Q9Y2W7 256 aa13.08□□□□□ -0.32
NDEL1-209ENST00000580738 A0A096LPF7 62 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 DISC1C4P0D8 188 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 SIVA1O15304 175 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 IFNA5P01569 189 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 HAMPP81172 84 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 ICAM4Q14773 271 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 PSG3Q16557 428 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 VSIG2Q96IQ7 327 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
NDEL1-209ENST00000580738 PRSS46E5RG02 174 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 H3BRN7 92 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 ATP6V1G2O95670 118 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 RLN2P04090 185 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 OR51S1Q8NGJ8 323 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
NDEL1-209ENST00000580738 UBR4Q5T4S7 5183 aa13.06□□□□□ -0.32
NDEL1-209ENST00000580738 J3QL48 77 aa13.05□□□□□ -0.32
NDEL1-209ENST00000580738 AKR1C4P17516 323 aa13.05□□□□□ -0.32
NDEL1-209ENST00000580738 C15orf40Q8WUR7 153 aa13.05□□□□□ -0.32
NDEL1-209ENST00000580738 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms