RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 LINC00052Q96N35 136 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 RARRES2Q99969 163 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 SEC11CQ9BY50 192 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 SLC35B3Q9H1N7 401 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 DOK5Q9P104 306 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 GNG13Q9P2W3 67 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 VAX2Q9UIW0 290 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 RNF24Q9Y225 148 aa6.12□□□□□ -1.43
KPNB1-210ENST00000580573 A0A1B0GV50 99 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 A0A1W2PRE2 83 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 ZNF98A6NK75 572 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 FAM74A7A6NL05 159 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 A8MWP6 167 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 PPP5D1E7EU14 171 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 TMEM250H0YL14 139 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 I3L521 148 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 SFTA3P0C7M3 94 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 CRYBB3P26998 211 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 ARL3P36405 182 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 CDX1P47902 265 aaPredicted RBP6.11□□□□□ -1.43
KPNB1-210ENST00000580573 HAGHQ16775 308 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 GPHB5Q86YW7 130 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 OR4X2Q8NGF9 303 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 C11orf52Q96A22 123 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 OR51M1Q9H341 326 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 TMEM231Q9H6L2 316 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 GNB4Q9HAV0 340 aa6.11□□□□□ -1.43
KPNB1-210ENST00000580573 PEF1Q9UBV8 284 aaKnown RBP6.11□□□□□ -1.43
KPNB1-210ENST00000580573 YTHDF2Q9Y5A9 579 aaKnown RBP6.11□□□□□ -1.43
KPNB1-210ENST00000580573 A0A087X0K7 114 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 K7EMT4 169 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 TCF21O43680 179 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 BUB3O43684 328 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 OR7C2O60412 319 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 PAGE4O60829 102 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 GGCTO75223 188 aaKnown RBP6.1□□□□□ -1.43
KPNB1-210ENST00000580573 IGHV3-11P01762 117 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 PYYP10082 97 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 S100A7P31151 101 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 PROK1P58294 105 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 UBE2L3P68036 154 aaKnown RBP6.1□□□□□ -1.43
KPNB1-210ENST00000580573 C1orf194Q5T5A4 169 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 FAM90A2PQ658T7 463 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 RXFP4Q8TDU9 374 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 C17orf77Q96MU5 243 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 TCEAL7Q9BRU2 100 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 PAXXQ9BUH6 204 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 NKX6-2Q9C056 277 aaPredicted RBP6.1□□□□□ -1.43
KPNB1-210ENST00000580573 EIF5A2Q9GZV4 153 aaKnown RBP6.1□□□□□ -1.43
KPNB1-210ENST00000580573 TREM1Q9NP99 234 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 RABAC1Q9UI14 185 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 JMJD1CQ15652 2540 aa6.1□□□□□ -1.43
KPNB1-210ENST00000580573 ATRQ13535 2644 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 GGTLC3B5MD39 225 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 C11orf94C9JXX5 98 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 LGALS9O00182 355 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 PDE6DO43924 150 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 ZNF253O75346 499 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 NDUFB4O95168 129 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 CRYBA1P05813 215 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 OR10J4P0C629 311 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 HIST1H1EP10412 219 aaKnown RBP6.09□□□□□ -1.43
KPNB1-210ENST00000580573 PDE6HQ13956 83 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 UNQ9165/PRO28630Q6UXU0 137 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 Q71RC1 249 aaPredicted RBP6.09□□□□□ -1.43
KPNB1-210ENST00000580573 BPIFA4PQ86YQ2 179 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 CYB561D1Q8N8Q1 229 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 GPR82Q96P67 336 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 AP5S1Q9NUS5 200 aa6.09□□□□□ -1.43
KPNB1-210ENST00000580573 TRBV19A0A075B6N1 114 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 F6UZH7 168 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 H3BQ15 152 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 NBEAP1P0C6P0 100 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 RPL7P18124 248 aaKnown RBP6.08□□□□□ -1.44
KPNB1-210ENST00000580573 NPPCP23582 126 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 ATP5G3P48201 142 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 FHL3Q13643 280 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 LEMD1Q68G75 181 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 C16orf54Q6UWD8 224 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 LYPD1Q8N2G4 141 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 ARL6IP6Q8N6S5 226 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 OR4F5Q8NH21 305 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 GLMPQ8WWB7 406 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 METTL26Q96S19 204 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 ZNF586Q9NXT0 402 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 SMAD5-AS1Q9Y6J3 95 aa6.08□□□□□ -1.44
KPNB1-210ENST00000580573 IGHV4OR15-8A0A075B7B6 117 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 A0A087WW49 117 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 IGHV3-35A0A0C4DH35 117 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 A0A1B0GUS0 222 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 F8W036 122 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 APOHP02749 345 aaPredicted RBP6.07□□□□□ -1.44
KPNB1-210ENST00000580573 UBE2G2P60604 165 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 KLF5Q13887 457 aaPredicted RBP6.07□□□□□ -1.44
KPNB1-210ENST00000580573 FAM74A3Q4VXF1 159 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 SOHLH1Q5JUK2 328 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 SIGLEC15Q6ZMC9 328 aa6.07□□□□□ -1.44
KPNB1-210ENST00000580573 IQCF2Q8IXL9 164 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms