RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 AKR1C8PQ5T2L2 129 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 FAM122CQ6P4D5 195 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 OR8I2Q8N0Y5 310 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 OR2K2Q8NGT1 345 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 FUT9Q9Y231 359 aa11.99□□□□□ -0.49
CSNK1D-212ENST00000580061 TRAV5A0A0B4J249 113 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 CD5P06127 495 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 OXLD1Q5BKU9 147 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 SIGLEC15Q6ZMC9 328 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 TMEM61Q8N0U2 210 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 GPR82Q96P67 336 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 NOTCH3Q9UM47 2321 aa11.98□□□□□ -0.49
CSNK1D-212ENST00000580061 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 A0A1W2PPV4 95 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 IZUMO1RA6ND01 250 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 HELTA6NFD8 242 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 UMAD1C9J7I0 102 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 RBPMS2Q6ZRY4 209 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 PHYHIPLQ96FC7 376 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 FAM167A-AS1Q96KT0 104 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 SLC25A2Q9BXI2 301 aa11.97□□□□□ -0.49
CSNK1D-212ENST00000580061 TSPAN4O14817 238 aa11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 EIF3GO75821 320 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 RPL11P62913 178 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 LCN12Q6JVE5 192 aa11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 BPIFA4PQ86YQ2 179 aa11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
CSNK1D-212ENST00000580061 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 G3V4G9 280 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 GALR1P47211 349 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 SULT1A2P50226 295 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 TAS2R45P59539 299 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 ZNF726P1Q15940 193 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 SSX7Q7RTT5 188 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 RAB24Q969Q5 203 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 TMEM14CQ9P0S9 112 aa11.95□□□□□ -0.5
CSNK1D-212ENST00000580061 CTXND1A0A1B0GTU2 59 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 ZNF785A8K8V0 405 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 HMGB3O15347 200 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 STAG3L2P0CL84 134 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 STAG3L3P0CL85 134 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 GP9P14770 177 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 FHITP49789 147 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 RAB5CP51148 216 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 KHDC3LQ587J8 217 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 ALKAL2Q6UX46 152 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 DPPA3Q6W0C5 159 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 STXBP6Q8NFX7 210 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 ZNF503Q96F45 646 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
CSNK1D-212ENST00000580061 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 PYYP10082 97 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 GBGT1Q8N5D6 347 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 OR51M1Q9H341 326 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 NRN1Q9NPD7 142 aa11.93□□□□□ -0.5
CSNK1D-212ENST00000580061 SORL1Q92673 2214 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 A0A087X0K7 114 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 OR7C2O60412 319 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 EGFEM1PQ0D2K5 195 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 GUCA2BQ16661 112 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 PQLC2Q6ZP29 291 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 FXYD5Q96DB9 178 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 HRH4Q9H3N8 390 aa11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 ZNF256Q9Y2P7 627 aaPredicted RBP11.92□□□□□ -0.5
CSNK1D-212ENST00000580061 DNAH3Q8TD57 4116 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 TRAV2A0A0B4J234 112 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 H3BQ15 152 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 K7EQG2 157 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 HIST1H1EP10412 219 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 TFPI2P48307 235 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 BEAN1Q3B7T3 259 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 TEX261Q6UWH6 196 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 WFDC3Q8IUB2 231 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 RNF141Q8WVD5 230 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 ZNF586Q9NXT0 402 aa11.91□□□□□ -0.5
CSNK1D-212ENST00000580061 MAP1LC3B2A6NCE7 125 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 OR4C46A6NHA9 309 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 SOCS3O14543 225 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 CXorf1O96002 111 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms