RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SCRT1Q9BWW7 348 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 MFFQ9GZY8 342 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 LYRM2Q9NU23 88 aaPredicted RBP10.79□□□□□ -0.68
SS18-212ENST00000579061 DOK5Q9P104 306 aa10.79□□□□□ -0.68
SS18-212ENST00000579061 FAM24AA6NFZ4 105 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 INMT-MINDY4F8WBC2 141 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 GOSR2O14653 212 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 OR5G3P0C626 314 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 DEFA1P59665 94 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 DEFA3P59666 94 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 S100A10P60903 97 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 RAB32Q13637 225 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 PMS2P11Q13670 270 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 CEMP1Q6PRD7 247 aaPredicted RBP10.78□□□□□ -0.68
SS18-212ENST00000579061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 NRARPQ7Z6K4 114 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 MARVELD1Q9BSK0 173 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 ARL6Q9H0F7 186 aa10.78□□□□□ -0.68
SS18-212ENST00000579061 S100A11P31949 105 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 SULT1A1P50225 295 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 RAB31Q13636 194 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 GDF5OSQ5U4N7 250 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 PATE2Q6UY27 113 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 TMEM252Q8N6L7 170 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 C11orf45Q8TAV5 145 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 MGST2Q99735 147 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 ARV1Q9H2C2 271 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 UQCC1Q9NVA1 299 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 KLK5Q9Y337 293 aaPredicted RBP10.77□□□□□ -0.69
SS18-212ENST00000579061 X6R8D5 127 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 DNAH1Q9P2D7 4330 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 RYR2Q92736 4967 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 ALMS1Q8TCU4 4167 aa10.77□□□□□ -0.69
SS18-212ENST00000579061 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
SS18-212ENST00000579061 A0A087X0K7 114 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 A0A0J9YX75 114 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 CST7O76096 145 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 HBG1P69891 147 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 HBG2P69892 147 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 CYCSP99999 105 aaKnown RBP10.76□□□□□ -0.69
SS18-212ENST00000579061 ATP6V1FQ16864 119 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 STX12Q86Y82 276 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
SS18-212ENST00000579061 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 NMES1Q9C002 83 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 HRH4Q9H3N8 390 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 CLEC5AQ9NY25 188 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 XCL2Q9UBD3 114 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 WDR83OSQ9Y284 106 aa10.76□□□□□ -0.69
SS18-212ENST00000579061 ELOA3CA0A087WX78 387 aaPredicted RBP10.75□□□□□ -0.69
SS18-212ENST00000579061 IGHV4-28A0A0C4DH34 117 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 A8MTW9 85 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 RLN2P04090 185 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 RBMY1A1P0DJD3 496 aaKnown RBP10.75□□□□□ -0.69
SS18-212ENST00000579061 RBMY1CP0DJD4 496 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 CAMLGP49069 296 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 DEFB1P60022 68 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 RBMY1FQ15415 496 aaKnown RBP10.75□□□□□ -0.69
SS18-212ENST00000579061 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
SS18-212ENST00000579061 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 DEFB4AO15263 64 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 NANOS2P60321 138 aaKnown RBP10.74□□□□□ -0.69
SS18-212ENST00000579061 PSG9Q00887 426 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 ZNF705AQ6ZN79 300 aaPredicted RBP10.74□□□□□ -0.69
SS18-212ENST00000579061 Q6ZRG5 221 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 LINC00305Q7Z4B0 112 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 ZNF709Q8N972 641 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 CHAC2Q8WUX2 184 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 NEU1Q99519 415 aa10.74□□□□□ -0.69
SS18-212ENST00000579061 TRAV8-2A0A0B4J237 113 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 SMIM9A6NGZ8 99 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 E5RGE8 158 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 F6UB75 175 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 MRPS12O15235 138 aaKnown RBP10.73□□□□□ -0.69
SS18-212ENST00000579061 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 DUSP14O95147 198 aaKnown RBP10.73□□□□□ -0.69
SS18-212ENST00000579061 SIX6O95475 246 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 IGKV3-20P01619 116 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 CXCL2P19875 107 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 RPL29P47914 159 aaKnown RBP10.73□□□□□ -0.69
SS18-212ENST00000579061 PRR20EP86478 221 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 PRR20CP86479 221 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 PRR20DP86480 221 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 PRR20BP86481 221 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 PRR20AP86496 221 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 FGL1Q08830 312 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 FAM78BQ5VT40 261 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 TMEM37Q8WXS4 190 aa10.73□□□□□ -0.69
SS18-212ENST00000579061 ZNF705FA8MVS1 300 aaPredicted RBP10.72□□□□□ -0.69
SS18-212ENST00000579061 MPDU1O75352 247 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 ZNF705DP0CH99 300 aaPredicted RBP10.72□□□□□ -0.69
SS18-212ENST00000579061 ZNF705BP0CI00 300 aaPredicted RBP10.72□□□□□ -0.69
SS18-212ENST00000579061 OPCMLQ14982 345 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 C10orf113Q5VZT2 155 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 LCN15Q6UWW0 184 aa10.72□□□□□ -0.69
SS18-212ENST00000579061 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms