RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C1QTNF4Q9BXJ3 329 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 SLC25A39Q9BZJ4 359 aaPredicted RBP4.82□□□□□ -1.64
TRAF4-213ENST00000578917 SEPSECSQ9HD40 501 aaKnown RBP4.82□□□□□ -1.64
TRAF4-213ENST00000578917 DNAJC4Q9NNZ3 241 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 RPRMQ9NS64 109 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 LYRM2Q9NU23 88 aaPredicted RBP4.82□□□□□ -1.64
TRAF4-213ENST00000578917 PPP1R14DQ9NXH3 145 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 ELOA3CA0A087WX78 387 aaPredicted RBP4.81□□□□□ -1.64
TRAF4-213ENST00000578917 UBE2L5PA0A1B0GUS4 154 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 H3BMM0 161 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 DEFB4AO15263 64 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 PET100P0DJ07 73 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 FGF7P21781 194 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 PMS2P11Q13670 270 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 LINC00305Q7Z4B0 112 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
TRAF4-213ENST00000578917 OR1L4Q8NGR5 311 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 SHANK2-AS3Q9BTD1 123 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 SCRT1Q9BWW7 348 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 NMES1Q9C002 83 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 ARV1Q9H2C2 271 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 SLC25A32Q9H2D1 315 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 CLEC5AQ9NY25 188 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 XCL2Q9UBD3 114 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 DNAH9Q9NYC9 4486 aa4.81□□□□□ -1.64
TRAF4-213ENST00000578917 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 IGSF23A1L1A6 192 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 PTTG1O95997 202 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 H2BFSP57053 126 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 FXYD7P58549 80 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 RHOBP62745 196 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 PSG9Q00887 426 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 NHLH2Q02577 135 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 IL15RAQ13261 267 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 CLINT1Q14677 625 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 FAM78BQ5VT40 261 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 SPATA31B1PQ5VZV4 182 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 MIC13Q5XKP0 118 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 IGFL4Q6B9Z1 124 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 FOXI2Q6ZQN5 318 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 BPIFA4PQ86YQ2 179 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 ZNF738Q8NE65 137 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 OR5C1Q8NGR4 320 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 C11orf45Q8TAV5 145 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 THAP6Q8TBB0 222 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 SCGB1C1Q8TD33 95 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 PPP1R1CQ8WVI7 109 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 PFDN5Q99471 154 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 MGST2Q99735 147 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 TMEM208Q9BTX3 173 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 MED28Q9H204 178 aa4.8□□□□□ -1.64
TRAF4-213ENST00000578917 SAV1Q9H4B6 383 aaPredicted RBP4.8□□□□□ -1.64
TRAF4-213ENST00000578917 C17orf112F2Z3M2 114 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 F6UB75 175 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 H3BRN7 92 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 MPDU1O75352 247 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 JTBO76095 146 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 DUSP14O95147 198 aaKnown RBP4.79□□□□□ -1.64
TRAF4-213ENST00000578917 IFNA5P01569 189 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
TRAF4-213ENST00000578917 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 RPL29P47914 159 aaKnown RBP4.79□□□□□ -1.64
TRAF4-213ENST00000578917 DEFB1P60022 68 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 PLP1P60201 277 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 B2MP61769 119 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 EWSR1Q01844 656 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAF4-213ENST00000578917 GDF5OSQ5U4N7 250 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 PATE2Q6UY27 113 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 RNF182Q8N6D2 247 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 MFFQ9GZY8 342 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 SLC39A9Q9NUM3 307 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 OR5AC2Q9NZP5 309 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 WDR83OSQ9Y284 106 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 KLK5Q9Y337 293 aaPredicted RBP4.79□□□□□ -1.64
TRAF4-213ENST00000578917 ALG5Q9Y673 324 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 PXMP4Q9Y6I8 212 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
TRAF4-213ENST00000578917 IGHV4-28A0A0C4DH34 117 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 A0A0J9YX75 114 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 H3BTX0 84 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 MPC2O95563 127 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 MIFP14174 115 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 RPL12P30050 165 aaKnown RBP4.78□□□□□ -1.64
TRAF4-213ENST00000578917 EMP1P54849 157 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 HIST1H1AQ02539 215 aaPredicted RBP4.78□□□□□ -1.64
TRAF4-213ENST00000578917 RGS21Q2M5E4 152 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 VWC2Q2TAL6 325 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 TMEM37Q8WXS4 190 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 C20orf173Q96LM9 149 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 SMIM3Q9BZL3 60 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 C11orf1Q9H5F2 150 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 KCNIP2Q9NS61 270 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 GOLT1BQ9Y3E0 138 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 TIMM9Q9Y5J7 89 aa4.78□□□□□ -1.64
TRAF4-213ENST00000578917 TRAV5A0A0B4J249 113 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 NUPR2A6NF83 97 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 H0YIZ8 118 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 SOCS3O14543 225 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 GIG44P09565 113 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms