RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SPATA31B1PQ5VZV4 182 aa11.91□□□□□ -0.5
CDK5RAP3-206ENST00000578018 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
CDK5RAP3-206ENST00000578018 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
CDK5RAP3-206ENST00000578018 TMEM189A5PLL7 270 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 F6UB75 175 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 CFDP00746 253 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 SPART-AS1P0CW21 52 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 TAS2R30P59541 319 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 SAMD13Q5VXD3 122 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 NDUFAF3Q9BU61 184 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 SLC35B3Q9H1N7 401 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 SLC45A2Q9UMX9 530 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 PKHD1P08F94 4074 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 DNAH2Q9P225 4427 aa11.9□□□□□ -0.5
CDK5RAP3-206ENST00000578018 IGHV3OR16-12A0A075B7B8 117 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 A0A0J9YX75 114 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 FAM25EA8MYX2 175 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 WRBO00258 174 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 MEOX2P50222 304 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 EMP1P54849 157 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-206ENST00000578018 H3BP45 60 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 GALR1P47211 349 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 PSG9Q00887 426 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 FAM78BQ5VT40 261 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 EBLN2Q6P2I7 272 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 NMES1Q9C002 83 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
CDK5RAP3-206ENST00000578018 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 A8MTW9 85 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 K7EPK0 472 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 SSNA1O43805 119 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 SSSCA1O60232 199 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 TSC22D2O75157 780 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 P0DMU3 169 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 FAM231AP0DMU4 169 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 FAM231CP0DMU5 169 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 GATA2P23769 480 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 CYCSP99999 105 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 ACOT7LQ6ZUV0 252 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 C1orf158Q8N1D5 194 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 POM121L12Q8N7R1 296 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 BPIFCQ8NFQ6 507 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 C16orf92Q96LL3 132 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 C11orf1Q9H5F2 150 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 RPRMQ9NS64 109 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 PSENENQ9NZ42 101 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 DOK5Q9P104 306 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 DKK2Q9UBU2 259 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 STRAPQ9Y3F4 350 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 DNAH17Q9UFH2 4485 aa11.87□□□□□ -0.51
CDK5RAP3-206ENST00000578018 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 TEX48A0A1B0GUV7 120 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 GOSR2O14653 212 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 AKR1C1Q04828 323 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 FAM222AQ5U5X8 452 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 TMEM14EPQ6UXP3 125 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 RSG1Q9BU20 258 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 KRTAP17-1Q9BYP8 105 aa11.86□□□□□ -0.51
CDK5RAP3-206ENST00000578018 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 SIX6O95475 246 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 ORM2P19652 201 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 H2BFSP57053 126 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 LINC00336Q6ZUF6 198 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 GPR82Q96P67 336 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 TMEM147Q9BVK8 224 aa11.85□□□□□ -0.51
CDK5RAP3-206ENST00000578018 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
CDK5RAP3-206ENST00000578018 HBE1P02100 147 aa11.84□□□□□ -0.51
CDK5RAP3-206ENST00000578018 RAB32Q13637 225 aa11.84□□□□□ -0.51
CDK5RAP3-206ENST00000578018 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
CDK5RAP3-206ENST00000578018 FAM210BQ96KR6 192 aa11.84□□□□□ -0.51
CDK5RAP3-206ENST00000578018 NIPSNAP3BQ9BS92 247 aa11.84□□□□□ -0.51
CDK5RAP3-206ENST00000578018 H3BRN7 92 aa11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 L7N2F9 121 aa11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 PVALBP20472 110 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 VAMP2P63027 116 aa11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 IGF2BP2-AS1Q96M15 143 aa11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 MGAT4CQ9UBM8 478 aa11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 LSM5Q9Y4Y9 91 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 YTHDF2Q9Y5A9 579 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-206ENST00000578018 NACAE9PAV3 2078 aa11.82□□□□□ -0.52
CDK5RAP3-206ENST00000578018 TRAV8-2A0A0B4J237 113 aa11.82□□□□□ -0.52
CDK5RAP3-206ENST00000578018 A0A1B0GVY2 172 aa11.82□□□□□ -0.52
CDK5RAP3-206ENST00000578018 SMCO3A2RU48 225 aa11.82□□□□□ -0.52
CDK5RAP3-206ENST00000578018 FNDC10F2Z333 226 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms