RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RTBDNQ9BSG5 229 aaPredicted RBP9.28□□□□□ -0.92
COPS3-214ENST00000577246 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
COPS3-214ENST00000577246 SLC25A32Q9H2D1 315 aa9.28□□□□□ -0.92
COPS3-214ENST00000577246 DMBT1Q9UGM3 2413 aaPredicted RBP9.28□□□□□ -0.92
COPS3-214ENST00000577246 ZNF98A6NK75 572 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 H3BNG1 76 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 PRM2P04554 102 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 AZU1P20160 251 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 OR5I1Q13606 314 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 LYPD1Q8N2G4 141 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 RBKSQ9H477 322 aa9.27□□□□□ -0.93
COPS3-214ENST00000577246 MRPS16Q9Y3D3 137 aaKnown RBP9.27□□□□□ -0.93
COPS3-214ENST00000577246 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 TRAV26-1A0A087WT03 109 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 DISC1C4P0D8 188 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 HTN1P15515 57 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 AKR1C4P17516 323 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 RHOBP62745 196 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 DLK1P80370 383 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 SSBP1Q04837 148 aaKnown RBP9.26□□□□□ -0.93
COPS3-214ENST00000577246 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 BPIFCQ8NFQ6 507 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
COPS3-214ENST00000577246 TMEM147Q9BVK8 224 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
COPS3-214ENST00000577246 EXTL2Q9UBQ6 330 aa9.26□□□□□ -0.93
COPS3-214ENST00000577246 A0A0B4J2A0 478 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 ERVFC1-1P60608 527 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 SRPXP78539 464 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 MRPS10P82664 201 aaKnown RBP9.25□□□□□ -0.93
COPS3-214ENST00000577246 Q5VSD8 79 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 THAP8Q8NA92 274 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 UHRF2Q96PU4 802 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 SLC25A39Q9BZJ4 359 aaPredicted RBP9.25□□□□□ -0.93
COPS3-214ENST00000577246 ZNF586Q9NXT0 402 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 SHPKQ9UHJ6 478 aa9.25□□□□□ -0.93
COPS3-214ENST00000577246 H7BYZ3 331 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 ORM2P19652 201 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 LINC00315P59091 139 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 NCS1P62166 190 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 RPP30P78346 268 aaKnown RBP9.24□□□□□ -0.93
COPS3-214ENST00000577246 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
COPS3-214ENST00000577246 FGL1Q08830 312 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 S100A7AQ86SG5 101 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 CCDC28AQ8IWP9 274 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 RNF182Q8N6D2 247 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 OR1S1Q8NH92 325 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
COPS3-214ENST00000577246 SCGB3A2Q96PL1 93 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 PRRT1Q99946 306 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 GPR132Q9UNW8 380 aa9.24□□□□□ -0.93
COPS3-214ENST00000577246 A0A087WXM4 84 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 A0A0J9YY99 117 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 ZNF701M0R085 212 aaPredicted RBP9.23□□□□□ -0.93
COPS3-214ENST00000577246 IFNA5P01569 189 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 RLN2P04090 185 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 ANXA3P12429 323 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 RPL7P18124 248 aaKnown RBP9.23□□□□□ -0.93
COPS3-214ENST00000577246 CDKN1BP46527 198 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 VBP1P61758 197 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 ESRGQ1W209 222 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
COPS3-214ENST00000577246 PAIP2BQ9ULR5 123 aaKnown RBP9.23□□□□□ -0.93
COPS3-214ENST00000577246 IGKV1OR2-108A0A075B7D4 117 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 TRAV8-2A0A0B4J237 113 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 ATP6V1G2O95670 118 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 AKAIN1P0CW23 69 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 RAP2BP61225 183 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 IGFL4Q6B9Z1 124 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 FAAP20Q6NZ36 180 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 LRRC20Q8TCA0 184 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 C17orf77Q96MU5 243 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 CIB3Q96Q77 187 aaPredicted RBP9.22□□□□□ -0.93
COPS3-214ENST00000577246 RNF24Q9Y225 148 aa9.22□□□□□ -0.93
COPS3-214ENST00000577246 SNURFLB1AK76 121 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 MED6O75586 246 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 XGP55808 180 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 NFE4Q86UQ8 179 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 SCP2D1Q9UJQ7 156 aa9.21□□□□□ -0.94
COPS3-214ENST00000577246 CXCL3P19876 107 aa9.2□□□□□ -0.94
COPS3-214ENST00000577246 AKR1C1Q04828 323 aa9.2□□□□□ -0.94
COPS3-214ENST00000577246 PSG3Q16557 428 aa9.2□□□□□ -0.94
COPS3-214ENST00000577246 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
COPS3-214ENST00000577246 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
COPS3-214ENST00000577246 DUXBA0A1W2PPF3 345 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 GAGE12BA1L429 117 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 H3BRN7 92 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 SIVA1O15304 175 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 GAGE7O76087 117 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 GAGE12FP0CL80 117 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 GAGE12GP0CL81 117 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 GAGE12IP0CL82 117 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 IAPPP10997 89 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 HOXA5P20719 270 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms