RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 TRBV19A0A075B6N1 114 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 GOLT1AQ6ZVE7 132 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 TMEM219Q86XT9 240 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 GBGT1Q8N5D6 347 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 CHRDL1Q9BU40 450 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 NAT8BQ9UHF3 227 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 MRPS12O15235 138 aaKnown RBP18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 RAB4BP61018 213 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 UNQ5815/PRO19632Q6UWF5 114 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 NRGNQ92686 78 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 PIMREGQ9BSJ6 248 aa18.5■□□□□ 0.55
NPLOC4-217ENST00000574897 TRAV30A0A087WSZ9 112 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 G3V318 75 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 C10orf105Q8TEF2 133 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 GNB1LQ9BYB4 327 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 LTAP01374 205 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 LINC00310P59036 64 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 PAX8Q06710 450 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 FMC1Q96HJ9 113 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 ZNF48Q96MX3 618 aaPredicted RBP18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 SOX21Q9Y651 276 aaPredicted RBP18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 ZNF462Q96JM2 2506 aa18.49■□□□□ 0.55
NPLOC4-217ENST00000574897 IGHV4-30-2A0A087WSY4 118 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 CTSGP08311 255 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 OR4F17Q8NGA8 305 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 THYN1Q9P016 225 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 IZUMO1RA6ND01 250 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 IGLV2-11P01706 119 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 ATP5J2P56134 94 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 SIGLEC15Q6ZMC9 328 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 GRAMD2BQ96HH9 432 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 PRDM13Q9H4Q3 707 aa18.48■□□□□ 0.55
NPLOC4-217ENST00000574897 TRAV40A0A0B4J280 105 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 CRISP2P16562 243 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 PRR31Q5SQ13 230 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 CIARTQ8N365 385 aaPredicted RBP18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 NUP35Q8NFH5 326 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 CMTM2Q8TAZ6 248 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 POLR3KQ9Y2Y1 108 aaPredicted RBP18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 VWC2LB2RUY7 222 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 Q86TA4 180 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 ZNF414Q96IQ9 312 aa18.47■□□□□ 0.55
NPLOC4-217ENST00000574897 M0R3E3 92 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 GZMBP10144 247 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 PRNTQ86SH4 94 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 TMEM18Q96B42 140 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 NEU1Q99519 415 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 FAM208BQ5VWN6 2430 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 CENPEQ02224 2701 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 AMY1AP04745 511 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 C15orf32Q32M92 178 aa18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 FAM110DQ8TAY7 271 aaPredicted RBP18.46■□□□□ 0.55
NPLOC4-217ENST00000574897 TRBV9A0A0B4J1U6 114 aa18.45■□□□□ 0.54
NPLOC4-217ENST00000574897 JOSD1Q15040 202 aaPredicted RBP18.45■□□□□ 0.54
NPLOC4-217ENST00000574897 GPR183P32249 361 aa18.45■□□□□ 0.54
NPLOC4-217ENST00000574897 GDF5OSQ5U4N7 250 aa18.45■□□□□ 0.54
NPLOC4-217ENST00000574897 TCF24Q7RTU0 167 aa18.45■□□□□ 0.54
NPLOC4-217ENST00000574897 HIGD1CA8MV81 97 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 C5orf56Q8N8D9 126 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 BBC3Q96PG8 261 aaPredicted RBP18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 SERF1AO75920 110 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 IGHV4-38-2P0DP08 117 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 RHOGP84095 191 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 WDR73Q6P4I2 378 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 CLEC2AQ6UVW9 174 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 TSKUQ8WUA8 353 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 MS4A10Q96PG2 267 aa18.44■□□□□ 0.54
NPLOC4-217ENST00000574897 IGHV1-69DA0A0B4J2H0 117 aa18.43■□□□□ 0.54
NPLOC4-217ENST00000574897 C19orf71A6NCJ1 209 aa18.43■□□□□ 0.54
NPLOC4-217ENST00000574897 IGHV1-69P01742 117 aa18.43■□□□□ 0.54
NPLOC4-217ENST00000574897 LINC00527Q9UJ94 153 aa18.43■□□□□ 0.54
NPLOC4-217ENST00000574897 SLAQ13239 276 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 PIFOQ8TCI5 191 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 SMIM12Q96EX1 92 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 GNB4Q9HAV0 340 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 POLQO75417 2590 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.42■□□□□ 0.548e-7■■■■□ 20.8
NPLOC4-217ENST00000574897 BMPR1BO00238 502 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 PRSS22Q9GZN4 317 aa18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 RPP21Q9H633 154 aaKnown RBP18.42■□□□□ 0.54
NPLOC4-217ENST00000574897 LRRK2Q5S007 2527 aa18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 ZNF785A8K8V0 405 aa18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 MT-ND6P03923 174 aa18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 RPL19P84098 196 aaKnown RBP18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 ZNF502Q8TBZ5 544 aa18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 ZNF331Q9NQX6 463 aaPredicted RBP18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 ANKRD17O75179 2603 aaKnown RBP18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 C9orf152Q5JTZ5 239 aa18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 FBN2P35556 2912 aa18.41■□□□□ 0.54
NPLOC4-217ENST00000574897 CD33P20138 364 aa18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 BAGE3Q86Y29 109 aa18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 GTSF1Q8WW33 167 aa18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 NOL4LQ96MY1 436 aaPredicted RBP18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 CSPG4Q6UVK1 2322 aa18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 P01737 135 aa18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 CLEC3BP05452 202 aa18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 SSBP4Q9BWG4 385 aaPredicted RBP18.4■□□□□ 0.54
NPLOC4-217ENST00000574897 HLA-DQA1P01909 254 aa18.39■□□□□ 0.53
NPLOC4-217ENST00000574897 SRIP30626 198 aa18.39■□□□□ 0.53
NPLOC4-217ENST00000574897 CAMPP49913 170 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 371.5 ms