RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 IGLC2P0DOY2 106 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 C5orf56Q8N8D9 126 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 NUDT10Q8NFP7 164 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 NRGNQ92686 78 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 NUDT11Q96G61 164 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 CSMD2Q7Z408 3487 aa10.99□□□□□ -0.65
VPS33B-208ENST00000574755 CTSGP08311 255 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 TXN2Q99757 166 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 ZNF462Q96JM2 2506 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 LINC01548A6NM66 108 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 G3V318 75 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 LTAP01374 205 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 RHOGP84095 191 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 VN1R17PQ8TDU5 208 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 C7orf69Q9H7B7 122 aa10.98□□□□□ -0.65
VPS33B-208ENST00000574755 TRBV9A0A0B4J1U6 114 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 MSMBP08118 114 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 IGHV4-38-2P0DP08 117 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 GOLT1AQ6ZVE7 132 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 CHRDL1Q9BU40 450 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 MOB4Q9Y3A3 225 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 TRAV8-1A0A0A6YYK1 113 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 MRPS12O15235 138 aaKnown RBP10.97□□□□□ -0.65
VPS33B-208ENST00000574755 AMBPP02760 352 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 GPR183P32249 361 aa10.97□□□□□ -0.65
VPS33B-208ENST00000574755 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
VPS33B-208ENST00000574755 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 RAB4BP61018 213 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 WDR73Q6P4I2 378 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 SIGLEC15Q6ZMC9 328 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 LYPD1Q8N2G4 141 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 MBD6Q96DN6 1003 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 ZNF414Q96IQ9 312 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.65
VPS33B-208ENST00000574755 GRIFINA4D1Z8 144 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 IZUMO1RA6ND01 250 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 MT-ND6P03923 174 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 Q86TA4 180 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 PIFOQ8TCI5 191 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 RABAC1Q9UI14 185 aa10.96□□□□□ -0.66
VPS33B-208ENST00000574755 S100A12P80511 92 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 COX19Q49B96 90 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 PRNTQ86SH4 94 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 ZNF843Q8N446 348 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 MEGF9Q9H1U4 602 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 IGHV3OR16-8A0A075B7F1 116 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 A0A1B0GUS0 222 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 BMPR1BO00238 502 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 AMY1AP04745 511 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 CLEC3BP05452 202 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 LINC00322Q6ZN03 302 aaPredicted RBP10.95□□□□□ -0.66
VPS33B-208ENST00000574755 TMEM190Q8WZ59 177 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 MS4A10Q96PG2 267 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 AAMDCQ9H7C9 122 aa10.95□□□□□ -0.66
VPS33B-208ENST00000574755 K7EQM0 130 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 IGLV2-11P01706 119 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 CRISP2P16562 243 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 PDE6HQ13956 83 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 KLK9Q2XQG4 91 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 TMEM18Q96B42 140 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 GSN-AS1Q9NRJ2 163 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 HIF1ANQ9NWT6 349 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 KLK9Q9UKQ9 250 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 B4DSR2 109 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 P01737 135 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 COX6B1P14854 86 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
VPS33B-208ENST00000574755 DSCR9P59020 149 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 CDPF1Q6NVV7 123 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 TMEM256Q8N2U0 113 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 NUP35Q8NFH5 326 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 DAZAP1Q96EP5 407 aaKnown RBP10.94□□□□□ -0.66
VPS33B-208ENST00000574755 NEU1Q99519 415 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
VPS33B-208ENST00000574755 GNB4Q9HAV0 340 aa10.94□□□□□ -0.66
VPS33B-208ENST00000574755 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
VPS33B-208ENST00000574755 UBR5O95071 2799 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-208ENST00000574755 FAM208BQ5VWN6 2430 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 EPG5Q9HCE0 2579 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 A1L4Q6 167 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 HIGD1CA8MV81 97 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 M0R3E3 92 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-208ENST00000574755 C9orf152Q5JTZ5 239 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-208ENST00000574755 GBGT1Q8N5D6 347 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
VPS33B-208ENST00000574755 SOX21Q9Y651 276 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-208ENST00000574755 TRAV41A0A0B4J266 112 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
VPS33B-208ENST00000574755 LY6EQ16553 131 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms