RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 PLAC8L1A1L4L8 177 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 FABP12A6NFH5 140 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 ORM2P19652 201 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 SOHLH1Q5JUK2 328 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 C1orf134Q5TEV5 83 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 RNF182Q8N6D2 247 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 OR1B1Q8NGR6 318 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 TMEM208Q9BTX3 173 aa15.47■□□□□ 0.07
SNF8-216ENST00000573795 PIGBOS1A0A0B4J2F0 54 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 WRBO00258 174 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 SYNGR2O43760 224 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 TMBIM6P55061 237 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 BAP18Q8IXM2 172 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 C15orf53Q8NAA6 179 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 BPIFCQ8NFQ6 507 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 CIB3Q96Q77 187 aaPredicted RBP15.46■□□□□ 0.07
SNF8-216ENST00000573795 BCL7BQ9BQE9 202 aa15.46■□□□□ 0.07
SNF8-216ENST00000573795 LYRM9A8MSI8 78 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 H3BRN7 92 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 MED6O75586 246 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 INSP01308 110 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 VAMP1P23763 118 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 ACOT7LQ6ZUV0 252 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 TMED3Q9Y3Q3 217 aa15.45■□□□□ 0.06
SNF8-216ENST00000573795 H3BP45 60 aa15.44■□□□□ 0.06
SNF8-216ENST00000573795 DUSP14O95147 198 aaKnown RBP15.44■□□□□ 0.06
SNF8-216ENST00000573795 SFT2D2O95562 160 aa15.44■□□□□ 0.06
SNF8-216ENST00000573795 AZU1P20160 251 aa15.44■□□□□ 0.06
SNF8-216ENST00000573795 FAM3BP58499 235 aaPredicted RBP15.44■□□□□ 0.06
SNF8-216ENST00000573795 PPP1R1AQ13522 171 aa15.44■□□□□ 0.06
SNF8-216ENST00000573795 GPR82Q96P67 336 aa15.44■□□□□ 0.06
SNF8-216ENST00000573795 TMEM147Q9BVK8 224 aa15.44■□□□□ 0.06
SNF8-216ENST00000573795 H3BMQ9 156 aa15.43■□□□□ 0.06
SNF8-216ENST00000573795 TSPOP30536 169 aa15.43■□□□□ 0.06
SNF8-216ENST00000573795 FAUP35544 74 aaKnown RBP15.43■□□□□ 0.06
SNF8-216ENST00000573795 TNP2Q05952 138 aa15.43■□□□□ 0.06
SNF8-216ENST00000573795 SPANXN5Q5MJ07 72 aa15.43■□□□□ 0.06
SNF8-216ENST00000573795 TRAV12-2A0A075B6T6 113 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 HOXB5P09067 269 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 RPP30P78346 268 aaKnown RBP15.42■□□□□ 0.06
SNF8-216ENST00000573795 AKR1C1Q04828 323 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 FCN2Q15485 313 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 ZNRF2Q8NHG8 242 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 SHANK2-AS3Q9BTD1 123 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 SLC25A39Q9BZJ4 359 aaPredicted RBP15.42■□□□□ 0.06
SNF8-216ENST00000573795 V9GYH0 126 aa15.42■□□□□ 0.06
SNF8-216ENST00000573795 BOLA2-SMG1P6H3BVE0 249 aa15.41■□□□□ 0.06
SNF8-216ENST00000573795 DEFB130BP0DP73 79 aa15.41■□□□□ 0.06
SNF8-216ENST00000573795 DEFB130AP0DP74 79 aa15.41■□□□□ 0.06
SNF8-216ENST00000573795 TMEM144Q7Z5S9 345 aa15.41■□□□□ 0.06
SNF8-216ENST00000573795 TOMM5Q8N4H5 51 aa15.41■□□□□ 0.06
SNF8-216ENST00000573795 MCFD2Q8NI22 146 aa15.41■□□□□ 0.06
SNF8-216ENST00000573795 PMS2P5A8MQ11 134 aa15.4■□□□□ 0.06
SNF8-216ENST00000573795 FGL1Q08830 312 aa15.4■□□□□ 0.06
SNF8-216ENST00000573795 CYP2G1PQ6ZSU1 146 aa15.4■□□□□ 0.06
SNF8-216ENST00000573795 ZNF738Q8NE65 137 aa15.4■□□□□ 0.06
SNF8-216ENST00000573795 SLC25A21Q9BQT8 299 aaPredicted RBP15.4■□□□□ 0.06
SNF8-216ENST00000573795 STRAPQ9Y3F4 350 aaKnown RBP15.4■□□□□ 0.06
SNF8-216ENST00000573795 NBDYA0A0U1RRE5 68 aa15.39■□□□□ 0.05
SNF8-216ENST00000573795 PRB4P10163 310 aaPredicted RBP15.39■□□□□ 0.05
SNF8-216ENST00000573795 AP3S2P59780 193 aa15.39■□□□□ 0.05
SNF8-216ENST00000573795 B2MP61769 119 aa15.39■□□□□ 0.05
SNF8-216ENST00000573795 ATG101Q9BSB4 218 aa15.39■□□□□ 0.05
SNF8-216ENST00000573795 F5H768 121 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 CXCL3P19876 107 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 PLP1P60201 277 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 POLR2GP62487 172 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNF8-216ENST00000573795 ID3Q02535 119 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 PYDC2Q56P42 97 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 OR8A1Q8NGG7 326 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 UHRF2Q96PU4 802 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 HIGD1AQ9Y241 93 aa15.38■□□□□ 0.05
SNF8-216ENST00000573795 A0A087X0K7 114 aa15.37■□□□□ 0.05
SNF8-216ENST00000573795 ADAP1O75689 374 aa15.37■□□□□ 0.05
SNF8-216ENST00000573795 CCNKO75909 580 aa15.37■□□□□ 0.05
SNF8-216ENST00000573795 IL5P05113 134 aa15.37■□□□□ 0.05
SNF8-216ENST00000573795 RPL7P18124 248 aaKnown RBP15.37■□□□□ 0.05
SNF8-216ENST00000573795 HIST1H1AQ02539 215 aaPredicted RBP15.37■□□□□ 0.05
SNF8-216ENST00000573795 SMCO3A2RU48 225 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 MRPS12O15235 138 aaKnown RBP15.36■□□□□ 0.05
SNF8-216ENST00000573795 NUDT3O95989 172 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 LINC00869P0C866 280 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 S100A7P31151 101 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 RAP2BP61225 183 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 C6orf223Q8N319 242 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 LINC00588Q9Y4M8 146 aa15.36■□□□□ 0.05
SNF8-216ENST00000573795 CBY3A6NI87 242 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 HYPMO75409 117 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 ATP5G1P05496 136 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 ATP5G3P48201 142 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 TAS2R60P59551 318 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 PSG3Q16557 428 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 PATE2Q6UY27 113 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 RNF141Q8WVD5 230 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 DEDD2Q8WXF8 326 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 LINC01587Q99440 93 aa15.35■□□□□ 0.05
SNF8-216ENST00000573795 C16orf90A8MZG2 172 aa15.34■□□□□ 0.05
SNF8-216ENST00000573795 RHOBP62745 196 aa15.34■□□□□ 0.05
SNF8-216ENST00000573795 TMEM256Q8N2U0 113 aa15.34■□□□□ 0.05
SNF8-216ENST00000573795 PSENENQ9NZ42 101 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms