RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PRB4P10163 310 aaPredicted RBP13.73□□□□□ -0.21
CCDC40-206ENST00000572083 CCR6P51684 374 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 TAS2R60P59551 318 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 FGL1Q08830 312 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 MZT2AQ6P582 158 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 ZNF738Q8NE65 137 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 IL22RA2Q969J5 263 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 UPK3BQ9BT76 320 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 GPR132Q9UNW8 380 aa13.73□□□□□ -0.21
CCDC40-206ENST00000572083 A0A1W2PPQ1 181 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 ORM2P19652 201 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 HIST1H1AQ02539 215 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-206ENST00000572083 ESRGQ1W209 222 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 Q5VSD8 79 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 LYZL2Q7Z4W2 148 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 TMEM256Q8N2U0 113 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 THAP8Q8NA92 274 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 OR1B1Q8NGR6 318 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 FUNDC2Q9BWH2 189 aa13.72□□□□□ -0.21
CCDC40-206ENST00000572083 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
CCDC40-206ENST00000572083 DISC1C4P0D8 188 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 IAPPP10997 89 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 M6PRP20645 277 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 GATA2P23769 480 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-206ENST00000572083 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-206ENST00000572083 LINC00315P59091 139 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 RHOBP62745 196 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 TMEM144Q7Z5S9 345 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 LYPD1Q8N2G4 141 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 OR1S1Q8NH92 325 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 RXFP4Q8TDU9 374 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 SLC45A2Q9UMX9 530 aa13.71□□□□□ -0.21
CCDC40-206ENST00000572083 A0A0B4J2A0 478 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-206ENST00000572083 HOXA5P20719 270 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 XGP55808 180 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 GGNBP1Q5YKI7 109 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 OR10J6PQ8NGY7 276 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 RNASE8Q8TDE3 154 aaKnown RBP13.7□□□□□ -0.22
CCDC40-206ENST00000572083 GPR82Q96P67 336 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 PPP1R14DQ9NXH3 145 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 SHPKQ9UHJ6 478 aa13.7□□□□□ -0.22
CCDC40-206ENST00000572083 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
CCDC40-206ENST00000572083 CFDP00746 253 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-206ENST00000572083 RAB11AP62491 216 aa13.69□□□□□ -0.22
CCDC40-206ENST00000572083 TMEM182Q6ZP80 229 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-206ENST00000572083 TMEM263Q8WUH6 116 aaKnown RBP13.69□□□□□ -0.22
CCDC40-206ENST00000572083 ZNF503Q96F45 646 aa13.69□□□□□ -0.22
CCDC40-206ENST00000572083 TMEM147Q9BVK8 224 aa13.69□□□□□ -0.22
CCDC40-206ENST00000572083 KCNIP3Q9Y2W7 256 aa13.69□□□□□ -0.22
CCDC40-206ENST00000572083 A0A087WXM4 84 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 Q6ZRN7 208 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-206ENST00000572083 BPIFCQ8NFQ6 507 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 OR8A1Q8NGG7 326 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 OR51S1Q8NGJ8 323 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 C15orf40Q8WUR7 153 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 AP3S1Q92572 193 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 PTTG2Q9NZH5 202 aa13.68□□□□□ -0.22
CCDC40-206ENST00000572083 AKR1C4P17516 323 aa13.67□□□□□ -0.22
CCDC40-206ENST00000572083 SSBP1Q04837 148 aaKnown RBP13.67□□□□□ -0.22
CCDC40-206ENST00000572083 ZNF493Q6ZR52 646 aa13.67□□□□□ -0.22
CCDC40-206ENST00000572083 FRZBQ92765 325 aa13.67□□□□□ -0.22
CCDC40-206ENST00000572083 GAGE12BA1L429 117 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 H3BRN7 92 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 GAGE7O76087 117 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 GAGE12FP0CL80 117 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 GAGE12GP0CL81 117 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 AKAIN1P0CW23 69 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 PRRT1Q99946 306 aa13.66□□□□□ -0.22
CCDC40-206ENST00000572083 FLG2Q5D862 2391 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-206ENST00000572083 SRRM2Q9UQ35 2752 aaKnown RBP13.65□□□□□ -0.22
CCDC40-206ENST00000572083 CDKN1BP46527 198 aa13.65□□□□□ -0.22
CCDC40-206ENST00000572083 KIR3DS1Q14943 382 aa13.65□□□□□ -0.22
CCDC40-206ENST00000572083 CLVS1Q8IUQ0 354 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-206ENST00000572083 LINC00612Q8N6U2 182 aa13.65□□□□□ -0.22
CCDC40-206ENST00000572083 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
CCDC40-206ENST00000572083 PGPEP1Q9NXJ5 209 aa13.65□□□□□ -0.22
CCDC40-206ENST00000572083 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
CCDC40-206ENST00000572083 H7BYZ3 331 aa13.64□□□□□ -0.23
CCDC40-206ENST00000572083 ADAP1O75689 374 aa13.64□□□□□ -0.23
CCDC40-206ENST00000572083 CXCL3P19876 107 aa13.64□□□□□ -0.23
CCDC40-206ENST00000572083 AKR1C1Q04828 323 aa13.64□□□□□ -0.23
CCDC40-206ENST00000572083 SMIM4Q8WVI0 70 aa13.64□□□□□ -0.23
CCDC40-206ENST00000572083 RLN2P04090 185 aa13.63□□□□□ -0.23
CCDC40-206ENST00000572083 S100A7P31151 101 aa13.63□□□□□ -0.23
CCDC40-206ENST00000572083 ERVFC1-1P60608 527 aa13.63□□□□□ -0.23
CCDC40-206ENST00000572083 PSG3Q16557 428 aa13.63□□□□□ -0.23
CCDC40-206ENST00000572083 SHANK2-AS3Q9BTD1 123 aa13.63□□□□□ -0.23
CCDC40-206ENST00000572083 PARD6GQ9BYG4 376 aaPredicted RBP13.63□□□□□ -0.23
CCDC40-206ENST00000572083 NAA50Q9GZZ1 169 aaKnown RBP13.63□□□□□ -0.23
CCDC40-206ENST00000572083 EREGO14944 169 aa13.62□□□□□ -0.23
CCDC40-206ENST00000572083 PITX3O75364 302 aa13.62□□□□□ -0.23
CCDC40-206ENST00000572083 RPL7P18124 248 aaKnown RBP13.62□□□□□ -0.23
CCDC40-206ENST00000572083 MRPS10P82664 201 aaKnown RBP13.62□□□□□ -0.23
CCDC40-206ENST00000572083 LRRC20Q8TCA0 184 aa13.62□□□□□ -0.23
CCDC40-206ENST00000572083 TMPRSS5Q9H3S3 457 aa13.62□□□□□ -0.23
CCDC40-206ENST00000572083 HIGD1AQ9Y241 93 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms