RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 UHRF2Q96PU4 802 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 PFDN5Q99471 154 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 KRTAP17-1Q9BYP8 105 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 U3KQE9 123 aa10.39□□□□□ -0.75
RPAIN-209ENST00000571558 CSMD3Q7Z407 3707 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 K7EMT4 169 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 IFNA7P01567 189 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 RAB5CP51148 216 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 DPPA3Q6W0C5 159 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 C20orf24Q9BUV8 137 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 SLC25A39Q9BZJ4 359 aaPredicted RBP10.38□□□□□ -0.75
RPAIN-209ENST00000571558 DAZ1Q9NQZ3 744 aaKnown RBP10.38□□□□□ -0.75
RPAIN-209ENST00000571558 RABAC1Q9UI14 185 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 HIGD1AQ9Y241 93 aa10.38□□□□□ -0.75
RPAIN-209ENST00000571558 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 H3BRN7 92 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF207O43670 478 aaKnown RBP10.37□□□□□ -0.75
RPAIN-209ENST00000571558 TM4SF20Q53R12 229 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 IL34Q6ZMJ4 242 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 LINC00305Q7Z4B0 112 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 RNF141Q8WVD5 230 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 RNF2Q99496 336 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 SHANK2-AS3Q9BTD1 123 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 UBQLN2Q9UHD9 624 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 FUT9Q9Y231 359 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
RPAIN-209ENST00000571558 RGS13O14921 159 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
RPAIN-209ENST00000571558 EDN2P20800 178 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 NPPCP23582 126 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 RHOBP62745 196 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 FAM122CQ6P4D5 195 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF767PQ75MW2 155 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 MIR17HGQ75NE6 70 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 FAM213BQ8TBF2 198 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 FAM167A-AS1Q96KT0 104 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 METTL26Q96S19 204 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 SCRT1Q9BWW7 348 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 MRPL32Q9BYC8 188 aaKnown RBP10.36□□□□□ -0.75
RPAIN-209ENST00000571558 SLC25A22Q9H936 323 aa10.36□□□□□ -0.75
RPAIN-209ENST00000571558 TRAV5A0A0B4J249 113 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 IGHV7-4-1A0A0J9YVY3 117 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 C2orf70A6NJV1 201 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 BUB3O43684 328 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 EIF3GO75821 320 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPAIN-209ENST00000571558 FRMD6-AS1P0C7T7 363 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 C8orf88P0DMB2 117 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 CDC34P49427 236 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-209ENST00000571558 LEMD1Q68G75 181 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 OR9G4Q8NGQ1 327 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 MBD3L1Q8WWY6 194 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 ACTR3CQ9C0K3 210 aaPredicted RBP10.35□□□□□ -0.75
RPAIN-209ENST00000571558 EDA2RQ9HAV5 297 aa10.35□□□□□ -0.75
RPAIN-209ENST00000571558 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
RPAIN-209ENST00000571558 CTXND1A0A1B0GTU2 59 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 A0A1W2PPV4 95 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF705EA8MWA4 302 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-209ENST00000571558 STAG3L2P0CL84 134 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 SAT2Q96F10 170 aaPredicted RBP10.34□□□□□ -0.75
RPAIN-209ENST00000571558 ZNF503Q96F45 646 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 TM2D3Q9BRN9 247 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 SLC25A2Q9BXI2 301 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 SMPXQ9UHP9 88 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 SORL1Q92673 2214 aa10.34□□□□□ -0.75
RPAIN-209ENST00000571558 IGHV3-49A0A0A0MS15 119 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 CHEK1O14757 476 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
RPAIN-209ENST00000571558 CSN3P07498 182 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 CBLN1P23435 193 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 C1orf194Q5T5A4 169 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 C16orf54Q6UWD8 224 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 LRRC20Q8TCA0 184 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 IGHV3OR16-13A0A075B7E8 117 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 IGHV3-74A0A0B4J1X5 117 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 TRAV1-1A0A0B4J248 108 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 OVOL1O14753 267 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 HMGB3O15347 200 aaKnown RBP10.33□□□□□ -0.76
RPAIN-209ENST00000571558 NMBP08949 121 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 FOLR2P14207 255 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 GP9P14770 177 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 LYPD6BQ8NI32 183 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 PCNPQ8WW12 178 aaKnown RBP10.33□□□□□ -0.76
RPAIN-209ENST00000571558 GLMPQ8WWB7 406 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 PEMTQ9UBM1 199 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
RPAIN-209ENST00000571558 STARD9Q9P2P6 4700 aa10.32□□□□□ -0.76
RPAIN-209ENST00000571558 IGHV3-66A0A0C4DH42 116 aa10.32□□□□□ -0.76
RPAIN-209ENST00000571558 MAP1LC3B2A6NCE7 125 aa10.32□□□□□ -0.76
RPAIN-209ENST00000571558 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms