RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 SACSQ9NZJ4 4579 aa7.02□□□□□ -1.29
CIITA-207ENST00000571545 ALMS1Q8TCU4 4167 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 IGHV3OR16-12A0A075B7B8 117 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 H3BRN7 92 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 HYPMO75409 117 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 ADAP1O75689 374 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 PLP1P60201 277 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 POLR2GP62487 172 aaKnown RBP eCLIP7.01□□□□□ -1.29
CIITA-207ENST00000571545 ZNF846Q147U1 533 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 OXA1LQ15070 435 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 IAH1Q2TAA2 248 aaPredicted RBP7.01□□□□□ -1.29
CIITA-207ENST00000571545 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 GDF5OSQ5U4N7 250 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 FAM78BQ5VT40 261 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 ZNF546Q86UE3 836 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 ZNF709Q8N972 641 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 TMEM208Q9BTX3 173 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 GGACTQ9BVM4 153 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 NPVFQ9HCQ7 196 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 NDUFA13Q9P0J0 144 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 CELA1Q9UNI1 258 aa7.01□□□□□ -1.29
CIITA-207ENST00000571545 A8MTW9 85 aa7□□□□□ -1.29
CIITA-207ENST00000571545 K7EPK0 472 aa7□□□□□ -1.29
CIITA-207ENST00000571545 SCGB1D2O95969 90 aa7□□□□□ -1.29
CIITA-207ENST00000571545 INSP01308 110 aa7□□□□□ -1.29
CIITA-207ENST00000571545 LINC00869P0C866 280 aa7□□□□□ -1.29
CIITA-207ENST00000571545 CXCL2P19875 107 aa7□□□□□ -1.29
CIITA-207ENST00000571545 BAK1Q16611 211 aa7□□□□□ -1.29
CIITA-207ENST00000571545 RRN3P1Q2M238 152 aa7□□□□□ -1.29
CIITA-207ENST00000571545 TEPPQ6URK8 271 aa7□□□□□ -1.29
CIITA-207ENST00000571545 MITD1Q8WV92 249 aa7□□□□□ -1.29
CIITA-207ENST00000571545 IGF2BP2-AS1Q96M15 143 aa7□□□□□ -1.29
CIITA-207ENST00000571545 NIPSNAP3BQ9BS92 247 aa7□□□□□ -1.29
CIITA-207ENST00000571545 SHANK2-AS3Q9BTD1 123 aa7□□□□□ -1.29
CIITA-207ENST00000571545 RSG1Q9BU20 258 aa7□□□□□ -1.29
CIITA-207ENST00000571545 SLC25A39Q9BZJ4 359 aaPredicted RBP7□□□□□ -1.29
CIITA-207ENST00000571545 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
CIITA-207ENST00000571545 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
CIITA-207ENST00000571545 A0A087X0K7 114 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 LOC102723971A0A1B0GUV8 181 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 L7N2F9 121 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 OR5G3P0C626 314 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 IL7P13232 177 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 VAMP2P63027 116 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 RAB31Q13636 194 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 TMEM14EPQ6UXP3 125 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 LINC00336Q6ZUF6 198 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 TMEM256Q8N2U0 113 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 ZNF738Q8NE65 137 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 LRRC20Q8TCA0 184 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 SLC35B3Q9H1N7 401 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 C20orf85Q9H1P6 137 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 DKK2Q9UBU2 259 aa6.99□□□□□ -1.29
CIITA-207ENST00000571545 EPPK1P58107 5090 aaKnown RBP6.98□□□□□ -1.29
CIITA-207ENST00000571545 BIRC6Q9NR09 4857 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 A6NJY4 79 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 GOSR2O14653 212 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 METTL15P1P0C7V9 234 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 ANXA7P20073 488 aaKnown RBP6.98□□□□□ -1.29
CIITA-207ENST00000571545 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
CIITA-207ENST00000571545 TSPOP30536 169 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 EMP1P54849 157 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 FXYD7P58549 80 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 FGL1Q08830 312 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 FAM222AQ5U5X8 452 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 LCN15Q6UWW0 184 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 POM121L12Q8N7R1 296 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 ZBTB8BQ8NAP8 495 aaPredicted RBP6.98□□□□□ -1.29
CIITA-207ENST00000571545 SLC50A1Q9BRV3 221 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 SCRT1Q9BWW7 348 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 PPP1R14DQ9NXH3 145 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 GSKIPQ9P0R6 139 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 FLVCR2Q9UPI3 526 aa6.98□□□□□ -1.29
CIITA-207ENST00000571545 LINC00854A0A1B0GVQ3 168 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 PMS2P5A8MQ11 134 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 F6UB75 175 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 BOLA2-SMG1P6H3BVE0 249 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 LYRM1O43325 122 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 GATA2P23769 480 aaPredicted RBP6.97□□□□□ -1.29
CIITA-207ENST00000571545 BTCP35070 178 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 CNN1P51911 297 aaKnown RBP6.97□□□□□ -1.29
CIITA-207ENST00000571545 DAD1P61803 113 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 RRAS2P62070 204 aaPredicted RBP6.97□□□□□ -1.29
CIITA-207ENST00000571545 BPIFA4PQ86YQ2 179 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 UBE2DNLQ8IWF7 75 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 C15orf53Q8NAA6 179 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 C20orf173Q96LM9 149 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 ARL6Q9H0F7 186 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
CIITA-207ENST00000571545 RCL1Q9Y2P8 373 aaKnown RBP6.97□□□□□ -1.29
CIITA-207ENST00000571545 YTHDF2Q9Y5A9 579 aaKnown RBP6.97□□□□□ -1.29
CIITA-207ENST00000571545 COX7A2P2O60397 106 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 CXCL3P19876 107 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 DEFB1P60022 68 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 RHOBP62745 196 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 HBG1P69891 147 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 HBG2P69892 147 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms