RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 IL5P05113 134 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DEFB1P60022 68 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 FAM78BQ5VT40 261 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 AMTNQ6UX39 209 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 OR10P1Q8NGE3 313 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 C20orf173Q96LM9 149 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RSG1Q9BU20 258 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SLC25A22Q9H936 323 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DOK5Q9P104 306 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 HIGD1AQ9Y241 93 aa12.26□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 A0A087X0K7 114 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 IGLL5B9A064 214 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 HYPMO75409 117 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 TCRBP04435 133 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 LINC00869P0C866 280 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RAP2BP61225 183 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 TEPPQ6URK8 271 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 OR4B1Q8NGF8 309 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 CCDC32Q9BV29 185 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RFNGQ9Y644 331 aa12.25□□□□□ -0.45
MAP1LC3B-208ENST00000570189 IGHV4-4A0A075B6R2 117 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SMCO3A2RU48 225 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 C7orf66A4D0T2 115 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 F6UB75 175 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DEDDO75618 318 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 CCNKO75909 580 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 MBPP02686 304 aaPredicted RBP12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SCRT1Q9BWW7 348 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SLC35B3Q9H1N7 401 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 MGAT4CQ9UBM8 478 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 GOLT1BQ9Y3E0 138 aa12.24□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DEFB131BA0A096LNP1 70 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 TRAV8-2A0A0B4J237 113 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DUSP14O95147 198 aaKnown RBP12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SPART-AS1P0CW21 52 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PRR20EP86478 221 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PRR20CP86479 221 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PRR20DP86480 221 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PRR20BP86481 221 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PRR20AP86496 221 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 OXA1LQ15070 435 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 C1orf158Q8N1D5 194 aa12.23□□□□□ -0.45
MAP1LC3B-208ENST00000570189 MRPS12O15235 138 aaKnown RBP12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 SCGB1D2O95969 90 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 CXCL2P19875 107 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 ZNF546Q86UE3 836 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 ZNF431Q8TF32 576 aaPredicted RBP12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 FAM210BQ96KR6 192 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 IGF2BP2-AS1Q96M15 143 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 C11orf1Q9H5F2 150 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 DKK2Q9UBU2 259 aa12.22□□□□□ -0.45
MAP1LC3B-208ENST00000570189 FXYD7P58549 80 aa12.21□□□□□ -0.45
MAP1LC3B-208ENST00000570189 RRAS2P62070 204 aaPredicted RBP12.21□□□□□ -0.45
MAP1LC3B-208ENST00000570189 ARL16Q0P5N6 197 aa12.21□□□□□ -0.45
MAP1LC3B-208ENST00000570189 ZNF846Q147U1 533 aa12.21□□□□□ -0.45
MAP1LC3B-208ENST00000570189 PATE2Q6UY27 113 aa12.21□□□□□ -0.45
MAP1LC3B-208ENST00000570189 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
MAP1LC3B-208ENST00000570189 HBE1P02100 147 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 OR5G3P0C626 314 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 CXCL3P19876 107 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 CNN1P51911 297 aaKnown RBP12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 B2MP61769 119 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 OR11H7Q8NGC8 314 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 UHRF2Q96PU4 802 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 ARL6Q9H0F7 186 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 ARV1Q9H2C2 271 aa12.2□□□□□ -0.46
MAP1LC3B-208ENST00000570189 AGPAT2O15120 278 aa12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 SLC38A11Q08AI6 406 aa12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 IL15RAQ13261 267 aa12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 GSG1LQ6UXU4 331 aa12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 HECTD4Q9Y4D8 3996 aa12.19□□□□□ -0.46
MAP1LC3B-208ENST00000570189 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 CCSO14618 274 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 GOSR2O14653 212 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 TSPOP30536 169 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 RRN3P1Q2M238 152 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 VWC2Q2TAL6 325 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 LCN15Q6UWW0 184 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 S100ZQ8WXG8 99 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 C2orf50Q96LR7 162 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 MGST2Q99735 147 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
MAP1LC3B-208ENST00000570189 LOC102723971A0A1B0GUV8 181 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 L7N2F9 121 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 INSP01308 110 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 H2AFB2P0C5Z0 115 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 P0DMU3 169 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 VAMP2P63027 116 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms