RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 NOTCH3Q9UM47 2321 aa17.72■□□□□ 0.43
RAB40C-212ENST00000569575 SIGLEC15Q6ZMC9 328 aa17.71■□□□□ 0.43
RAB40C-212ENST00000569575 TCF24Q7RTU0 167 aa17.71■□□□□ 0.43
RAB40C-212ENST00000569575 UHRF2Q96PU4 802 aa17.71■□□□□ 0.43
RAB40C-212ENST00000569575 TMEM14CQ9P0S9 112 aa17.71■□□□□ 0.43
RAB40C-212ENST00000569575 CD300EQ496F6 205 aaPredicted RBP17.7■□□□□ 0.42
RAB40C-212ENST00000569575 ACTR3CQ9C0K3 210 aaPredicted RBP17.7■□□□□ 0.42
RAB40C-212ENST00000569575 SEPSECSQ9HD40 501 aaKnown RBP17.7■□□□□ 0.42
RAB40C-212ENST00000569575 IGHV3-49A0A0A0MS15 119 aa17.69■□□□□ 0.42
RAB40C-212ENST00000569575 CMC4P56277 68 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-212ENST00000569575 EGFEM1PQ0D2K5 195 aa17.69■□□□□ 0.42
RAB40C-212ENST00000569575 SAMD5Q5TGI4 173 aa17.69■□□□□ 0.42
RAB40C-212ENST00000569575 SCRT1Q9BWW7 348 aa17.69■□□□□ 0.42
RAB40C-212ENST00000569575 IGHV3OR16-13A0A075B7E8 117 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 IGHV3-74A0A0B4J1X5 117 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 BOLA2-SMG1P6H3BVE0 249 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 GUK1Q16774 197 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 KHDC3LQ587J8 217 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 GCSAMLQ5JQS6 135 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 PQLC2Q6ZP29 291 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 TMEM61Q8N0U2 210 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 SLC25A22Q9H936 323 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 RPRMQ9NS64 109 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 ANK2Q01484 3957 aa17.68■□□□□ 0.42
RAB40C-212ENST00000569575 VWFP04275 2813 aa17.67■□□□□ 0.42
RAB40C-212ENST00000569575 OR4C46A6NHA9 309 aa17.67■□□□□ 0.42
RAB40C-212ENST00000569575 EDN2P20800 178 aa17.67■□□□□ 0.42
RAB40C-212ENST00000569575 CDC34P49427 236 aaPredicted RBP17.67■□□□□ 0.42
RAB40C-212ENST00000569575 RAB2AP61019 212 aa17.67■□□□□ 0.42
RAB40C-212ENST00000569575 RPP25LQ8N5L8 163 aaKnown RBP17.67■□□□□ 0.42
RAB40C-212ENST00000569575 NRN1Q9NPD7 142 aa17.67■□□□□ 0.42
RAB40C-212ENST00000569575 A0A087X0K7 114 aa17.66■□□□□ 0.42
RAB40C-212ENST00000569575 IGHV3-66A0A0C4DH42 116 aa17.66■□□□□ 0.42
RAB40C-212ENST00000569575 RPL11P62913 178 aaKnown RBP17.66■□□□□ 0.42
RAB40C-212ENST00000569575 TMED6Q8WW62 240 aa17.66■□□□□ 0.42
RAB40C-212ENST00000569575 CLEC5AQ9NY25 188 aa17.66■□□□□ 0.42
RAB40C-212ENST00000569575 CTXND1A0A1B0GTU2 59 aa17.65■□□□□ 0.42
RAB40C-212ENST00000569575 ATF4P18848 351 aaPredicted RBP17.65■□□□□ 0.42
RAB40C-212ENST00000569575 OXLD1Q5BKU9 147 aa17.65■□□□□ 0.42
RAB40C-212ENST00000569575 FAM110AQ9BQ89 295 aa17.65■□□□□ 0.42
RAB40C-212ENST00000569575 HRH4Q9H3N8 390 aa17.65■□□□□ 0.42
RAB40C-212ENST00000569575 RFNGQ9Y644 331 aa17.65■□□□□ 0.42
RAB40C-212ENST00000569575 ZNF785A8K8V0 405 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 DNASE2O00115 360 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-212ENST00000569575 MRPS12O15235 138 aaKnown RBP17.64■□□□□ 0.41
RAB40C-212ENST00000569575 KPRPQ5T749 579 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-212ENST00000569575 FAM122CQ6P4D5 195 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 MIR17HGQ75NE6 70 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 RAB24Q969Q5 203 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 FAM167A-AS1Q96KT0 104 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 OR51M1Q9H341 326 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 SORL1Q92673 2214 aa17.64■□□□□ 0.41
RAB40C-212ENST00000569575 ZNF253O75346 499 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 STAG3L2P0CL84 134 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 STAG3L3P0CL85 134 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 HIST1H1EP10412 219 aaKnown RBP17.63■□□□□ 0.41
RAB40C-212ENST00000569575 SULT1A2P50226 295 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 PDE6HQ13956 83 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 LEMD1Q68G75 181 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 SLC25A2Q9BXI2 301 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 MS4A6AQ9H2W1 248 aa17.63■□□□□ 0.41
RAB40C-212ENST00000569575 ZNF256Q9Y2P7 627 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-212ENST00000569575 ID1P41134 155 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 BEAN1Q3B7T3 259 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 MORN5Q5VZ52 161 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 LCN15Q6UWW0 184 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 LRRC20Q8TCA0 184 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 PAXXQ9BUH6 204 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 BOLA1Q9Y3E2 137 aa17.62■□□□□ 0.41
RAB40C-212ENST00000569575 CXorf1O96002 111 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 IGLC2P0DOY2 106 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 GP9P14770 177 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 GUCA2BQ16661 112 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 DCANP1Q8TF63 244 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 RNF141Q8WVD5 230 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 SLC50A1Q9BRV3 221 aa17.61■□□□□ 0.41
RAB40C-212ENST00000569575 TRAV5A0A0B4J249 113 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 TEX46H3BTG2 121 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 K7EQG2 157 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 ISLRO14498 428 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 OR7C2O60412 319 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 GTSCR1Q86UQ5 136 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 MBD3L1Q8WWY6 194 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 SMAD5-AS1Q9Y6J3 95 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 TRRAPQ9Y4A5 3859 aa17.6■□□□□ 0.41
RAB40C-212ENST00000569575 IZUMO1RA6ND01 250 aa17.59■□□□□ 0.41
RAB40C-212ENST00000569575 SNRPD3P62318 126 aaKnown RBP17.59■□□□□ 0.41
RAB40C-212ENST00000569575 SPATA31B1PQ5VZV4 182 aa17.59■□□□□ 0.41
RAB40C-212ENST00000569575 LYPD1Q8N2G4 141 aa17.59■□□□□ 0.41
RAB40C-212ENST00000569575 TMEM167BQ9NRX6 74 aa17.59■□□□□ 0.41
RAB40C-212ENST00000569575 G3V4G9 280 aa17.58■□□□□ 0.4
RAB40C-212ENST00000569575 NBEAP1P0C6P0 100 aa17.58■□□□□ 0.4
RAB40C-212ENST00000569575 PSMB3P49720 205 aa17.58■□□□□ 0.4
RAB40C-212ENST00000569575 PSG9Q00887 426 aa17.58■□□□□ 0.4
RAB40C-212ENST00000569575 MGAM2Q2M2H8 2515 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 TRAV1-1A0A0B4J248 108 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 IFNA7P01567 189 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 TEX261Q6UWH6 196 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.57■□□□□ 0.4
RAB40C-212ENST00000569575 FAM213BQ8TBF2 198 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms