RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	NPCDR1	Q9BY65	106 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	FKBP11	Q9NYL4	201 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	LAMTOR3	Q9UHA4	124 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	HS3ST2	Q9Y278	367 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAPPC1	Q9Y5R8	145 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	MINOS1-NBL1	R4GNA1	71 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	POLE	Q07864	2286 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	MYH11	P35749	1972 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	SCN9A	Q15858	1988 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	NUP210L	Q5VU65	1888 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	TNS3	Q68CZ2	1445 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	FGD6	Q6ZV73	1430 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	ERBIN	Q96RT1	1412 aa		0.88	□□□□□ -2.27
UBR1-209	ENST00000569243	DICER1	Q9UPY3	1922 aa	Known RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	CUL9	Q8IWT3	2517 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	ECM29	Q5VYK3	1845 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SPEF2	Q9C093	1822 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	A2M	P01023	1474 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	CAMSAP2	Q08AD1	1489 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF518A	Q6AHZ1	1483 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SCN8A	Q9UQD0	1980 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FER1L6	Q2WGJ9	1857 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	IGLV3-9	A0A075B6K5	115 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAV13-1	A0A0B4J241	112 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	IGHV1-58	A0A0C4DH39	117 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A0J9YW62	118 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	IRGM	A1A4Y4	181 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	C11orf86	A6NJI1	115 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243		B4DSR2	109 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243		H3BMG7	143 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	CCDC179	H3BU77	68 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243		J3QR89	54 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	RER1	O15258	196 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	PSCA	O43653	123 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	GGCT	O75223	188 aa	Known RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SNAPC5	O75971	98 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	NDUFB2	O95178	105 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SLC25A5	P05141	298 aa	Known RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF728	P0DKX0	622 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243		P0DMU3	169 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM231A	P0DMU4	169 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM231C	P0DMU5	169 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	CSRP1	P21291	193 aa	Known RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	XCL1	P47992	114 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FOXA3	P55318	350 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FXYD7	P58549	80 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	YPEL3	P61236	119 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SNRPD3	P62318	126 aa	Known RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	DYNLT1	P63172	113 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SELENOW	P63302	87 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	LGALSL	Q3ZCW2	172 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	HSD17B12	Q53GQ0	312 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	KHDC3L	Q587J8	217 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM27B	Q5VT28	67 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	LYZL1	Q6UWQ5	148 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	LYZL2	Q7Z4W2	148 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	DEFB128	Q7Z7B8	93 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	LYPD6	Q86Y78	171 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	LINC00471	Q8N535	108 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	BPIFB6	Q8NFQ5	453 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	OR5H6	Q8NGV6	325 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SMCR5	Q8TEV8	140 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF418	Q8TF45	676 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	C1orf54	Q8WWF1	131 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	PRELID3A	Q96N28	172 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SCGB3A1	Q96QR1	104 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	LXN	Q9BS40	222 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	MND1	Q9BWT6	205 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SMDT1	Q9H4I9	107 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SCN3B	Q9NY72	215 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	SPANXC	Q9NY87	97 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	COMMD3	Q9UBI1	195 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	TRPM6	Q9BX84	2022 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM135B	Q49AJ0	1406 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	PRG4	Q92954	1404 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	MYH7B	A7E2Y1	1941 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	KDM5C	P41229	1560 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	MED1	Q15648	1581 aa	Predicted RBP	0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	EML6	Q6ZMW3	1958 aa		0.87	□□□□□ -2.27
UBR1-209	ENST00000569243	TRPM3	Q9HCF6	1732 aa	Predicted RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	UHRF1BP1L	A0JNW5	1464 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	MBD5	Q9P267	1494 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	CDK5RAP2	Q96SN8	1893 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TOPBP1	Q92547	1522 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	LCT	P09848	1927 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	IGKV1D-42	A0A075B6H8	117 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	IGHV3-15	A0A0B4J1V0	119 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TRBV7-6	A0A0J9YX20	115 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A1W2PNM2	257 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	C20orf202	A1L168	122 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	FAM92A	A1XBS5	289 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	GGTLC3	B5MD39	225 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	UBFD1	O14562	309 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	SLC22A1	O15245	554 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	CREBL2	O60519	120 aa	Predicted RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	HIST1H2BK	O60814	126 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TIMM17B	O60830	172 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	NPY	P01303	97 aa		0.86	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms