RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PBDC1Q9BVG4 233 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 MGAT4CQ9UBM8 478 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 UBQLN2Q9UHD9 624 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 TP53TG1Q9Y2A0 90 aa6.8□□□□□ -1.32
CAPN3-219ENST00000569136 IGKV1OR2-108A0A075B7D4 117 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 PMS2P5A8MQ11 134 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 H3BP45 60 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 K7EQG2 157 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 METTL15P1P0C7V9 234 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 S100A11P31949 105 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 ID1P41134 155 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 BCAP31P51572 246 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 LYZP61626 148 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 OR2F1Q13607 317 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 PXDC1Q5TGL8 231 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 SIGLEC15Q6ZMC9 328 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 ACOT7LQ6ZUV0 252 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 OR8I2Q8N0Y5 310 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 STXBP6Q8NFX7 210 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 PPP1R14BQ96C90 147 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 GPR82Q96P67 336 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 WFDC10AQ9H1F0 79 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 MAP6D1Q9H9H5 199 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 NRN1Q9NPD7 142 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
CAPN3-219ENST00000569136 RCL1Q9Y2P8 373 aaKnown RBP6.79□□□□□ -1.32
CAPN3-219ENST00000569136 SMCO3A2RU48 225 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 F5H697 171 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 K7EPK0 472 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 CCSO14618 274 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 HYPMO75409 117 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 GALR1P47211 349 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 DEFB131AP59861 70 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 PLP1P60201 277 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 ATP6V1FQ16864 119 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 TMEM41BQ5BJD5 291 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 CYP2G1PQ6ZSU1 146 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 DCANP1Q8TF63 244 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 TMEM147Q9BVK8 224 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 NMES1Q9C002 83 aa6.78□□□□□ -1.32
CAPN3-219ENST00000569136 LSM5Q9Y4Y9 91 aaKnown RBP6.78□□□□□ -1.32
CAPN3-219ENST00000569136 GOSR2O14653 212 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 SPRY2O43597 315 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 LYL1P12980 280 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 RPL35AP18077 110 aaKnown RBP6.77□□□□□ -1.33
CAPN3-219ENST00000569136 ORM2P19652 201 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 SULT1A1P50225 295 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 CAV2P51636 162 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 HBG1P69891 147 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 HBG2P69892 147 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 STX12Q86Y82 276 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 STHQ8IWL8 128 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 MUC7Q8TAX7 377 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 GATAD1Q8WUU5 269 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 RNF183Q96D59 192 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 SLC25A31Q9H0C2 315 aa6.77□□□□□ -1.33
CAPN3-219ENST00000569136 LYRM2Q9NU23 88 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-219ENST00000569136 FAM24AA6NFZ4 105 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 ZNF98A6NK75 572 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 SSNA1O43805 119 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 MEOX2P50222 304 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 S100A10P60903 97 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 NUTF2P61970 127 aaKnown RBP6.76□□□□□ -1.33
CAPN3-219ENST00000569136 RRAS2P62070 204 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-219ENST00000569136 RAB32Q13637 225 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 SPATA31B1PQ5VZV4 182 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 MORN3Q6PF18 240 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-219ENST00000569136 ZNF546Q86UE3 836 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 TMEM252Q8N6L7 170 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 OR1B1Q8NGR6 318 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 C11orf1Q9H5F2 150 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 EDA2RQ9HAV5 297 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 HIGD1AQ9Y241 93 aa6.76□□□□□ -1.33
CAPN3-219ENST00000569136 E5RGE8 158 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 ISLRO14498 428 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 TRIAP1O43715 76 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 CST7O76096 145 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 PTTG1O95997 202 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 ZNF688P0C7X2 276 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 SPP1P10451 314 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 RPL7P18124 248 aaKnown RBP6.75□□□□□ -1.33
CAPN3-219ENST00000569136 SLC38A11Q08AI6 406 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 ARL16Q0P5N6 197 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 TMEM182Q6ZP80 229 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-219ENST00000569136 Q6ZRG5 221 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 TMEM217Q8N7C4 229 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 SHANK2-AS3Q9BTD1 123 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 RSG1Q9BU20 258 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-219ENST00000569136 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 UQCC1Q9NVA1 299 aa6.75□□□□□ -1.33
CAPN3-219ENST00000569136 AGPAT2O15120 278 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 MPDU1O75352 247 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 CCNKO75909 580 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 SLPIP03973 132 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms