RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 S100A7P31151 101 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 RAB2AP61019 212 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 SUMO1P63165 101 aaKnown RBP6.39□□□□□ -1.39
SF3B3-212ENST00000568539 ACOT6Q3I5F7 207 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-212ENST00000568539 C1orf194Q5T5A4 169 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 EIF5AL1Q6IS14 154 aaKnown RBP6.39□□□□□ -1.39
SF3B3-212ENST00000568539 C16orf54Q6UWD8 224 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 LINC00305Q7Z4B0 112 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 S100A7AQ86SG5 101 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 RPP25LQ8N5L8 163 aaKnown RBP6.39□□□□□ -1.39
SF3B3-212ENST00000568539 OR10G4Q8NGN3 311 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 OR10G9Q8NGN4 311 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 OR10G7Q8NGN6 311 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 TMED6Q8WW62 240 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 PHYHIPLQ96FC7 376 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 NARS2Q96I59 477 aaKnown RBP6.39□□□□□ -1.39
SF3B3-212ENST00000568539 MCRIP2Q9BUT9 160 aaKnown RBP6.39□□□□□ -1.39
SF3B3-212ENST00000568539 RPRMQ9NS64 109 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 MLXQ9UH92 298 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 NOTCH1P46531 2555 aa6.39□□□□□ -1.39
SF3B3-212ENST00000568539 TRAV5A0A0B4J249 113 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 UMAD1C9J7I0 102 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 IGLV1-51P01701 117 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 IGLL1P15814 213 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 BMI1P35226 326 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 INSL3P51460 131 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 RHOBP62745 196 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 DEFB114Q30KQ6 69 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 TMEM41BQ5BJD5 291 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 AKR1C8PQ5T2L2 129 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 FAM78BQ5VT40 261 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 SPATA31B1PQ5VZV4 182 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 FAM90A2PQ658T7 463 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 LEMD1Q68G75 181 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 FAM122CQ6P4D5 195 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 MIR17HGQ75NE6 70 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 DYNLRB2Q8TF09 96 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 GLMPQ8WWB7 406 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 GRAMD2BQ96HH9 432 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 FAM210AQ96ND0 272 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 RNF2Q99496 336 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 MRPL32Q9BYC8 188 aaKnown RBP6.38□□□□□ -1.39
SF3B3-212ENST00000568539 TMEM231Q9H6L2 316 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 SLC25A22Q9H936 323 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 TECRQ9NZ01 308 aaKnown RBP6.38□□□□□ -1.39
SF3B3-212ENST00000568539 RNF24Q9Y225 148 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 FUT9Q9Y231 359 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 SELENOKQ9Y6D0 94 aa6.38□□□□□ -1.39
SF3B3-212ENST00000568539 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 ZNF726P1Q15940 193 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 CD300EQ496F6 205 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-212ENST00000568539 TCF24Q7RTU0 167 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 TMEM61Q8N0U2 210 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 OR8I2Q8N0Y5 310 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 FAM167A-AS1Q96KT0 104 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 CLUHP3Q96NS8 147 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 SLC25A2Q9BXI2 301 aa6.37□□□□□ -1.39
SF3B3-212ENST00000568539 A0A1W2PPV4 95 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 IZUMO1RA6ND01 250 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 HELTA6NFD8 242 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 MRPS12O15235 138 aaKnown RBP6.36□□□□□ -1.39
SF3B3-212ENST00000568539 EIF3GO75821 320 aaKnown RBP eCLIP6.36□□□□□ -1.39
SF3B3-212ENST00000568539 CD5P06127 495 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 GP9P14770 177 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 RPL7P18124 248 aaKnown RBP6.36□□□□□ -1.39
SF3B3-212ENST00000568539 CDC34P49427 236 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-212ENST00000568539 FHITP49789 147 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 SULT1A2P50226 295 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 FAM74A1Q5RGS3 127 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 ALKAL2Q6UX46 152 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 DPPA3Q6W0C5 159 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 SIGLEC15Q6ZMC9 328 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 SSX7Q7RTT5 188 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 BPIFA4PQ86YQ2 179 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 OR2K2Q8NGT1 345 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 RAB24Q969Q5 203 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 C17orf77Q96MU5 243 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 GPR82Q96P67 336 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 ACTR3CQ9C0K3 210 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-212ENST00000568539 TMEM14CQ9P0S9 112 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 SMAD5-AS1Q9Y6J3 95 aa6.36□□□□□ -1.39
SF3B3-212ENST00000568539 TRAV25A0A0B4J276 109 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 TSPAN4O14817 238 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 HMGB3O15347 200 aaKnown RBP6.35□□□□□ -1.39
SF3B3-212ENST00000568539 STAG3L2P0CL84 134 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 STAG3L3P0CL85 134 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 IGLC2P0DOY2 106 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 GALR1P47211 349 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 RAB5CP51148 216 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 TAS2R45P59539 299 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 KHDC3LQ587J8 217 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 LCN12Q6JVE5 192 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 TEX261Q6UWH6 196 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 RBPMS2Q6ZRY4 209 aaKnown RBP6.35□□□□□ -1.39
SF3B3-212ENST00000568539 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 FAM213BQ8TBF2 198 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 ZNF503Q96F45 646 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 GPR61Q9BZJ8 451 aa6.35□□□□□ -1.39
SF3B3-212ENST00000568539 IGKV3-7A0A075B6H7 116 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms