RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 MGAT4CQ9UBM8 478 aa6.93□□□□□ -1.3
SF3B3-211ENST00000568291 H3BTX0 84 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 SOCS3O14543 225 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 AGPAT2O15120 278 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 HYPMO75409 117 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 DEDDO75618 318 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 HLA-DMBP28068 263 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 SNRPD3P62318 126 aaKnown RBP6.92□□□□□ -1.3
SF3B3-211ENST00000568291 MORN5Q5VZ52 161 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 RNF182Q8N6D2 247 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 TMEM252Q8N6L7 170 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 MGST2Q99735 147 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 SLC25A39Q9BZJ4 359 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-211ENST00000568291 GPN1Q9HCN4 374 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-211ENST00000568291 OR5AC2Q9NZP5 309 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 HIGD1AQ9Y241 93 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 TP53TG1Q9Y2A0 90 aa6.92□□□□□ -1.3
SF3B3-211ENST00000568291 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 TRAV5A0A0B4J249 113 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 H0YIZ8 118 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 H3BMM0 161 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 H3BRN7 92 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 H2BFSP57053 126 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 NHLH2Q02577 135 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 C1orf194Q5T5A4 169 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 MIC13Q5XKP0 118 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 OR4B1Q8NGF8 309 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 MARVELD1Q9BSK0 173 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 SHANK2-AS3Q9BTD1 123 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 PFDN2Q9UHV9 154 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 SLC45A2Q9UMX9 530 aa6.91□□□□□ -1.3
SF3B3-211ENST00000568291 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
SF3B3-211ENST00000568291 IGHV3OR16-12A0A075B7B8 117 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 UBE2L5PA0A1B0GUS4 154 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 SSNA1O43805 119 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 PVALBP20472 110 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-211ENST00000568291 ID1P41134 155 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 GALR1P47211 349 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 SULT1A1P50225 295 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 DEFA1P59665 94 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 DEFA3P59666 94 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 NANOS2P60321 138 aaKnown RBP6.9□□□□□ -1.3
SF3B3-211ENST00000568291 RAP2BP61225 183 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 THAP6Q8TBB0 222 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 SLC35B3Q9H1N7 401 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 ARV1Q9H2C2 271 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 LYRM2Q9NU23 88 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-211ENST00000568291 FBXL17Q9UF56 701 aa6.9□□□□□ -1.3
SF3B3-211ENST00000568291 IGHV4-28A0A0C4DH34 117 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 CFDP00746 253 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-211ENST00000568291 PRM2P04554 102 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 RBMY1A1P0DJD3 496 aaKnown RBP6.89□□□□□ -1.31
SF3B3-211ENST00000568291 RBMY1CP0DJD4 496 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 NUP62P37198 522 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-211ENST00000568291 CAMLGP49069 296 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 PSMB3P49720 205 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 BAXQ07812 192 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 RBMY1FQ15415 496 aaKnown RBP6.89□□□□□ -1.31
SF3B3-211ENST00000568291 GCSAMLQ5JQS6 135 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 FAM78BQ5VT40 261 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 CEMP1Q6PRD7 247 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-211ENST00000568291 ZNF767PQ75MW2 155 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 LINC00305Q7Z4B0 112 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 GATAD1Q8WUU5 269 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 SAV1Q9H4B6 383 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-211ENST00000568291 UQCC1Q9NVA1 299 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 X6R8D5 127 aa6.89□□□□□ -1.31
SF3B3-211ENST00000568291 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 COX7A2P2O60397 106 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 PRAF2O60831 178 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 SPP1P10451 314 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 HLA-DRB4P13762 266 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-211ENST00000568291 FGF7P21781 194 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 PLP1P60201 277 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 SELENOTP62341 195 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 CLINT1Q14677 625 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-211ENST00000568291 ZNF546Q86UE3 836 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 PPP1R1CQ8WVI7 109 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 RNF126Q9BV68 326 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 GGACTQ9BVM4 153 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 WDR83OSQ9Y284 106 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-211ENST00000568291 ALG5Q9Y673 324 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 HLA-DRB4X5D2U9 266 aa6.88□□□□□ -1.31
SF3B3-211ENST00000568291 KMT2AQ03164 3969 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 ELOA3CA0A087WX78 387 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-211ENST00000568291 A0A0J9YX75 114 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 ZNF705FA8MVS1 300 aaPredicted RBP6.87□□□□□ -1.31
SF3B3-211ENST00000568291 FNDC10F2Z333 226 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 H3BQ15 152 aa6.87□□□□□ -1.31
SF3B3-211ENST00000568291 ISLRO14498 428 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms