RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 PRM2P04554 102 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 SNRPCP09234 159 aaKnown RBP8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 OR5G3P0C626 314 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 IL7P13232 177 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 TCTAP57738 103 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 TMEM144Q7Z5S9 345 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 UHRF2Q96PU4 802 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 SLC25A39Q9BZJ4 359 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
GTF3C1-208ENST00000567843 H3BRN7 92 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 LINC00869P0C866 280 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 SPART-AS1P0CW21 52 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 HTN3P15516 51 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 MEOX2P50222 304 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 RAP2BP61225 183 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 SLC38A11Q08AI6 406 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 ARL16Q0P5N6 197 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 FAM222AQ5U5X8 452 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 ZBTB8BQ8NAP8 495 aaPredicted RBP8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 SMIM8Q96KF7 97 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 NEU1Q99519 415 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 RNF126Q9BV68 326 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 SLC45A2Q9UMX9 530 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 HIGD1AQ9Y241 93 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 GOLT1BQ9Y3E0 138 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 RFNGQ9Y644 331 aa8.74□□□□□ -1.01
GTF3C1-208ENST00000567843 FAT2Q9NYQ8 4349 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 TRAV6A0A075B6T7 132 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 LOC102723971A0A1B0GUV8 181 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 FAM25EA8MYX2 175 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 M0R2Z0 102 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 PLA2G10O15496 165 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 HYPMO75409 117 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 HBE1P02100 147 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 DLK1P80370 383 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 SPINK13Q1W4C9 94 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 AMTNQ6UX39 209 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 TMEM14EPQ6UXP3 125 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 SHANK2-AS3Q9BTD1 123 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 TMEM208Q9BTX3 173 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 ARL6Q9H0F7 186 aa8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 RCL1Q9Y2P8 373 aaKnown RBP8.73□□□□□ -1.01
GTF3C1-208ENST00000567843 HERC2O95714 4834 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 SMIM9A6NGZ8 99 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 ZNF705GA8MUZ8 300 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 MBPP02686 304 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 SPATA31B1PQ5VZV4 182 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 PATE2Q6UY27 113 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 ZNF738Q8NE65 137 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 OR11H7Q8NGC8 314 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 OR10P1Q8NGE3 313 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 MITD1Q8WV92 249 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 SEC22CQ9BRL7 303 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 NDUFAF3Q9BU61 184 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 C20orf85Q9H1P6 137 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 MGAT4CQ9UBM8 478 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 LSM5Q9Y4Y9 91 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 YTHDF2Q9Y5A9 579 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-208ENST00000567843 TRAV12-2A0A075B6T6 113 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 C7orf66A4D0T2 115 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 TMEM189A5PLL7 270 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 H3BTX0 84 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 M0R2N4 97 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 AMBPP02760 352 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 HIST1H1AQ02539 215 aaPredicted RBP8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 RRN3P1Q2M238 152 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 SAMD13Q5VXD3 122 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 BAP18Q8IXM2 172 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 LRRC20Q8TCA0 184 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 GPR82Q96P67 336 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 NIPSNAP3BQ9BS92 247 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 ARV1Q9H2C2 271 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 NPVFQ9HCQ7 196 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
GTF3C1-208ENST00000567843 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 L7N2F9 121 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 GOSR2O14653 212 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 LYRM1O43325 122 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 TSC22D2O75157 780 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 RPL7P18124 248 aaKnown RBP8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 BCAP31P51572 246 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 SELENOTP62341 195 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 RHOBP62745 196 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 VAMP2P63027 116 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 TEPPQ6URK8 271 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 IGF2BP2-AS1Q96M15 143 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 DNAH11Q96DT5 4516 aa8.7□□□□□ -1.02
GTF3C1-208ENST00000567843 C5orf51A6NDU8 294 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 FAM24AA6NFZ4 105 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 AGPAT2O15120 278 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 CRXO43186 299 aaPredicted RBP8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 CST7O76096 145 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 DUSP14O95147 198 aaKnown RBP8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 TCRBP04435 133 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 HTN1P15515 57 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 CXCL3P19876 107 aa8.69□□□□□ -1.02
GTF3C1-208ENST00000567843 S100A7P31151 101 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms