RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 WDR61Q9GZS3 305 aaKnown RBP12.74□□□□□ -0.37
COMMD4-220ENST00000567720 FGL1Q08830 312 aa12.73□□□□□ -0.37
COMMD4-220ENST00000567720 AQP10Q96PS8 301 aa12.73□□□□□ -0.37
COMMD4-220ENST00000567720 WFDC1Q9HC57 220 aa12.73□□□□□ -0.37
COMMD4-220ENST00000567720 SLC39A9Q9NUM3 307 aa12.73□□□□□ -0.37
COMMD4-220ENST00000567720 DNAH7Q8WXX0 4024 aa12.72□□□□□ -0.37
COMMD4-220ENST00000567720 LOC102724200A0A096LPH7 203 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-220ENST00000567720 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-220ENST00000567720 GALR1P47211 349 aa12.72□□□□□ -0.37
COMMD4-220ENST00000567720 LINC00305Q7Z4B0 112 aa12.72□□□□□ -0.37
COMMD4-220ENST00000567720 FXYD6-FXYD2A0A087WZ82 144 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.37
COMMD4-220ENST00000567720 S100A7P31151 101 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.37
COMMD4-220ENST00000567720 GCSAMLQ5JQS6 135 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 PSMG4Q5JS54 123 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 C10orf113Q5VZT2 155 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 GPR82Q96P67 336 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 RSG1Q9BU20 258 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 RETNQ9HD89 108 aa12.71□□□□□ -0.37
COMMD4-220ENST00000567720 ELOA3CA0A087WX78 387 aaPredicted RBP12.7□□□□□ -0.38
COMMD4-220ENST00000567720 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
COMMD4-220ENST00000567720 Q6ZRG5 221 aa12.7□□□□□ -0.38
COMMD4-220ENST00000567720 OR1L4Q8NGR5 311 aa12.7□□□□□ -0.38
COMMD4-220ENST00000567720 PFDN5Q99471 154 aa12.7□□□□□ -0.38
COMMD4-220ENST00000567720 TNFSF18Q9UNG2 199 aa12.7□□□□□ -0.38
COMMD4-220ENST00000567720 SMLR1H3BR10 107 aa12.69□□□□□ -0.38
COMMD4-220ENST00000567720 RPL7P18124 248 aaKnown RBP12.69□□□□□ -0.38
COMMD4-220ENST00000567720 PSMB3P49720 205 aa12.69□□□□□ -0.38
COMMD4-220ENST00000567720 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
COMMD4-220ENST00000567720 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
COMMD4-220ENST00000567720 RCHY1Q96PM5 261 aa12.69□□□□□ -0.38
COMMD4-220ENST00000567720 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
COMMD4-220ENST00000567720 PARD6GQ9BYG4 376 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-220ENST00000567720 SEPSECSQ9HD40 501 aaKnown RBP12.69□□□□□ -0.38
COMMD4-220ENST00000567720 KCNIP2Q9NS61 270 aa12.69□□□□□ -0.38
COMMD4-220ENST00000567720 A0A087X0K7 114 aa12.68□□□□□ -0.38
COMMD4-220ENST00000567720 KNCNA6PVL3 124 aa12.68□□□□□ -0.38
COMMD4-220ENST00000567720 ATF4P18848 351 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-220ENST00000567720 MEOX2P50222 304 aa12.68□□□□□ -0.38
COMMD4-220ENST00000567720 DEFB1P60022 68 aa12.68□□□□□ -0.38
COMMD4-220ENST00000567720 DNAJC4Q9NNZ3 241 aa12.68□□□□□ -0.38
COMMD4-220ENST00000567720 U3KQK5 164 aa12.68□□□□□ -0.38
COMMD4-220ENST00000567720 ISLRO14498 428 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 IFNA5P01569 189 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 Q6ZNX1 250 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
COMMD4-220ENST00000567720 ZNF709Q8N972 641 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 C20orf173Q96LM9 149 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 ZMAT4Q9H898 229 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
COMMD4-220ENST00000567720 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 TRAV5A0A0B4J249 113 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 APOC4P55056 127 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 SAMD13Q5VXD3 122 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 SPATA31B1PQ5VZV4 182 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 RNF24Q9Y225 148 aa12.66□□□□□ -0.38
COMMD4-220ENST00000567720 KIR2DL5BA0A0G2JN68 375 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 KIR2DL5BA0A0G2JPC4 375 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 SNRPCP09234 159 aaKnown RBP12.65□□□□□ -0.38
COMMD4-220ENST00000567720 IGLC2P0DOY2 106 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 ID1P41134 155 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 IGFL4Q6B9Z1 124 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 BPIFA4PQ86YQ2 179 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 STHQ8IWL8 128 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 KIR2DL5AQ8N109 375 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 INO80EQ8NBZ0 244 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-220ENST00000567720 KIR2DL5BQ8NHK3 375 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 LINC00052Q96N35 136 aa12.65□□□□□ -0.38
COMMD4-220ENST00000567720 SLC17A3O00476 420 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 ARPC5O15511 151 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 ZNF266Q14584 549 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 DEFB135Q30KP9 77 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 RNF182Q8N6D2 247 aa12.64□□□□□ -0.39
COMMD4-220ENST00000567720 H3BTX0 84 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 CXCL2P19875 107 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 C4BPBP20851 252 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 LCN15Q6UWW0 184 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 MIR17HGQ75NE6 70 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 SAV1Q9H4B6 383 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-220ENST00000567720 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
COMMD4-220ENST00000567720 F6UB75 175 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 H3BMM0 161 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 H3BQ15 152 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 PYYP10082 97 aa12.62□□□□□ -0.39
COMMD4-220ENST00000567720 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms