RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 NPIPB6E9PJ23 425 aa14.02□□□□□ -0.17
CMTM3-214ENST00000567572 P01737 135 aa14.02□□□□□ -0.17
CMTM3-214ENST00000567572 RAB4AP20338 218 aa14.02□□□□□ -0.17
CMTM3-214ENST00000567572 HBBP68871 147 aa14.02□□□□□ -0.17
CMTM3-214ENST00000567572 CFHR4Q92496 578 aa14.02□□□□□ -0.17
CMTM3-214ENST00000567572 ZNF48Q96MX3 618 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-214ENST00000567572 RCHY1Q96PM5 261 aa14.02□□□□□ -0.17
CMTM3-214ENST00000567572 USP9XQ93008 2570 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-214ENST00000567572 IGKV1-17P01599 117 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 IGHV4-39P01824 125 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 KLRD1Q13241 179 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 CYB5R2Q6BCY4 276 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 Q86TA4 180 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 ZNF843Q8N446 348 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 SPOCK3Q9BQ16 436 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 BPESC1Q9GZL8 116 aa14.01□□□□□ -0.17
CMTM3-214ENST00000567572 ARHGAP32A7KAX9 2087 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 OOSP1A8MZH6 123 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 DIRC3C9JPN6 131 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 K7EIM0 57 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 CNIH1O95406 144 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 DMRTA1Q5VZB9 504 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 BPIFA4PQ86YQ2 179 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 VN1R17PQ8TDU5 208 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 ZFYVE26Q68DK2 2539 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 H3BRN7 92 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 LMO4P61968 165 aa14□□□□□ -0.17
CMTM3-214ENST00000567572 DAZAP1Q96EP5 407 aaKnown RBP14□□□□□ -0.17
CMTM3-214ENST00000567572 ALKBH7Q9BT30 221 aaPredicted RBP14□□□□□ -0.17
CMTM3-214ENST00000567572 APELAP0DMC3 54 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 PMCHP20382 165 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 KRTDAPP60985 99 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 CCDC144NLQ6NUI1 221 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 VMO1Q7Z5L0 202 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 Q8N976 141 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 OR4F17Q8NGA8 305 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 SNHG12Q9BXW3 62 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 SIRPDQ9H106 197 aa13.99□□□□□ -0.17
CMTM3-214ENST00000567572 IGHV3-21A0A0B4J1V1 117 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 NPIPB5A8MRT5 1133 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 EREGO14944 169 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 NUTF2P61970 127 aaKnown RBP13.98□□□□□ -0.17
CMTM3-214ENST00000567572 GDF5OSQ5U4N7 250 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 RBPMS2Q6ZRY4 209 aaKnown RBP13.98□□□□□ -0.17
CMTM3-214ENST00000567572 NIT1Q86X76 327 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 TMEM75Q8N9X5 138 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 BORCS7Q96B45 105 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 FAM103A1Q9BTL3 118 aaKnown RBP13.98□□□□□ -0.17
CMTM3-214ENST00000567572 TRBV19A0A075B6N1 114 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 IGHV2-70DA0A0C4DH43 119 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 K7EQM0 130 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 C16orf54Q6UWD8 224 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 CCL19Q99731 98 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 RPH3ALQ9UNE2 315 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 ZFP30Q9Y2G7 519 aa13.98□□□□□ -0.17
CMTM3-214ENST00000567572 ASH1LQ9NR48 2969 aaKnown RBP13.97□□□□□ -0.17
CMTM3-214ENST00000567572 CD33P20138 364 aa13.97□□□□□ -0.17
CMTM3-214ENST00000567572 PDE6HQ13956 83 aa13.97□□□□□ -0.17
CMTM3-214ENST00000567572 LEMD1Q68G75 181 aa13.97□□□□□ -0.17
CMTM3-214ENST00000567572 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
CMTM3-214ENST00000567572 HSBP1O75506 76 aa13.96□□□□□ -0.17
CMTM3-214ENST00000567572 IGLC2P0DOY2 106 aa13.96□□□□□ -0.17
CMTM3-214ENST00000567572 PMCHL1Q16048 86 aa13.96□□□□□ -0.17
CMTM3-214ENST00000567572 C5orf64Q2M2E5 130 aa13.96□□□□□ -0.17
CMTM3-214ENST00000567572 RNF125Q96EQ8 232 aa13.96□□□□□ -0.17
CMTM3-214ENST00000567572 GSX1Q9H4S2 264 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-214ENST00000567572 WI2-2373I1.2A0A1W2PRP0 233 aa13.96□□□□□ -0.18
CMTM3-214ENST00000567572 IGLV2-11P01706 119 aa13.96□□□□□ -0.18
CMTM3-214ENST00000567572 FOXA3P55318 350 aaPredicted RBP13.96□□□□□ -0.18
CMTM3-214ENST00000567572 PAM16Q9Y3D7 125 aa13.96□□□□□ -0.18
CMTM3-214ENST00000567572 HILPDAQ9Y5L2 63 aa13.96□□□□□ -0.18
CMTM3-214ENST00000567572 UBR5O95071 2799 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-214ENST00000567572 ZNF462Q96JM2 2506 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 SERTM2A0A1B0GWG4 89 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 VWC2LB2RUY7 222 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 SCGB2A1O75556 95 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 C3orf79P0CE67 100 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 CTRLP40313 264 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 MINOS1Q5TGZ0 78 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 ZNF562Q6V9R5 426 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 LINC00322Q6ZN03 302 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-214ENST00000567572 ARL6IP6Q8N6S5 226 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 ZNF491Q8N8L2 437 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 RNF114Q9Y508 228 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 MINOS1-NBL1R4GNA1 71 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 MYO18BQ8IUG5 2567 aa13.95□□□□□ -0.18
CMTM3-214ENST00000567572 COL8A1P27658 744 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 CAMPP49913 170 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 ZNF705AQ6ZN79 300 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-214ENST00000567572 GTSF1Q8WW33 167 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 CHCHD1Q96BP2 118 aaKnown RBP13.94□□□□□ -0.18
CMTM3-214ENST00000567572 SPTAN1Q13813 2472 aaKnown RBP13.94□□□□□ -0.18
CMTM3-214ENST00000567572 IGLV11-55A0A075B6I3 123 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 A0A1B0GW15 77 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 HLA-DRB1P01911 266 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 EBI3Q14213 229 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 ZNF124Q15973 351 aa13.94□□□□□ -0.18
CMTM3-214ENST00000567572 TDRG1Q3Y452 100 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms