RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FAM3BP58499 235 aaPredicted RBP10.63□□□□□ -0.71
RNF40-209ENST00000566703 PLP1P60201 277 aa10.63□□□□□ -0.71
RNF40-209ENST00000566703 DAD1P61803 113 aa10.63□□□□□ -0.71
RNF40-209ENST00000566703 AKR1C1Q04828 323 aa10.63□□□□□ -0.71
RNF40-209ENST00000566703 TMEM182Q6ZP80 229 aaPredicted RBP10.63□□□□□ -0.71
RNF40-209ENST00000566703 S100A7AQ86SG5 101 aa10.63□□□□□ -0.71
RNF40-209ENST00000566703 TMEM208Q9BTX3 173 aa10.63□□□□□ -0.71
RNF40-209ENST00000566703 V9GYH0 126 aa10.63□□□□□ -0.71
RNF40-209ENST00000566703 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 RPL7P18124 248 aaKnown RBP10.62□□□□□ -0.71
RNF40-209ENST00000566703 GATA2P23769 480 aaPredicted RBP10.62□□□□□ -0.71
RNF40-209ENST00000566703 S100A5P33763 92 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 CNN1P51911 297 aaKnown RBP10.62□□□□□ -0.71
RNF40-209ENST00000566703 RAP2BP61225 183 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 SELENOTP62341 195 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 SOHLH1Q5JUK2 328 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 GSG1LQ6UXU4 331 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 C15orf53Q8NAA6 179 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
RNF40-209ENST00000566703 H3BRN7 92 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 CRXO43186 299 aaPredicted RBP10.61□□□□□ -0.71
RNF40-209ENST00000566703 IL5P05113 134 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 HTN3P15516 51 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 TSPOP30536 169 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 ACOT7LQ6ZUV0 252 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 OR11H7Q8NGC8 314 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 SHANK2-AS3Q9BTD1 123 aa10.61□□□□□ -0.71
RNF40-209ENST00000566703 SLC25A39Q9BZJ4 359 aaPredicted RBP10.61□□□□□ -0.71
RNF40-209ENST00000566703 IGLV2-18A0A075B6J9 118 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 TRAV8-2A0A0B4J237 113 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 C9orf170A2RU37 121 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 FNDC10F2Z333 226 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 HYPMO75409 117 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 INSP01308 110 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 TMEM88Q6PEY1 159 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 PSENENQ9NZ42 101 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 HIGD1AQ9Y241 93 aa10.6□□□□□ -0.71
RNF40-209ENST00000566703 NAP1L6A6NFF2 107 aa10.59□□□□□ -0.71
RNF40-209ENST00000566703 PMS2P5A8MQ11 134 aa10.59□□□□□ -0.71
RNF40-209ENST00000566703 H3BP45 60 aa10.59□□□□□ -0.71
RNF40-209ENST00000566703 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
RNF40-209ENST00000566703 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
RNF40-209ENST00000566703 NPVFQ9HCQ7 196 aa10.59□□□□□ -0.71
RNF40-209ENST00000566703 A0A087X0K7 114 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
RNF40-209ENST00000566703 BOLA2-SMG1P6H3BVE0 249 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 K7EPK0 472 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 M0R2Z0 102 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 ADAP1O75689 374 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 DLK1P80370 383 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 FGL1Q08830 312 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
RNF40-209ENST00000566703 SMCO3A2RU48 225 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 NDUFB6O95139 128 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 OR5G3P0C626 314 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 LINC00869P0C866 280 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 CXCL3P19876 107 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 TAS2R30P59541 319 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 PSG3Q16557 428 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 C1orf134Q5TEV5 83 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 PXDC1Q5TGL8 231 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 IGFL4Q6B9Z1 124 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 OR8A1Q8NGG7 326 aa10.57□□□□□ -0.72
RNF40-209ENST00000566703 CBY3A6NI87 242 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 TAS2R60P59551 318 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 RHOBP62745 196 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 C4orf46Q504U0 113 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 SPANXN2Q5MJ10 180 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 OR10P1Q8NGE3 313 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 LRRC20Q8TCA0 184 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 ATG101Q9BSB4 218 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 SRRQ9GZT4 340 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 PPP1R14DQ9NXH3 145 aa10.56□□□□□ -0.72
RNF40-209ENST00000566703 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 TSC22D2O75157 780 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 PRM2P04554 102 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 CXCL2P19875 107 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 AZU1P20160 251 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 INPP1P49441 399 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
RNF40-209ENST00000566703 CNPY1Q3B7I2 92 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 BAP18Q8IXM2 172 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 LINC01587Q99440 93 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 GGACTQ9BVM4 153 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 MGAT4CQ9UBM8 478 aa10.55□□□□□ -0.72
RNF40-209ENST00000566703 CCDC160A6NGH7 325 aa10.54□□□□□ -0.72
RNF40-209ENST00000566703 MRPS12O15235 138 aaKnown RBP10.54□□□□□ -0.72
RNF40-209ENST00000566703 SSSCA1O60232 199 aa10.54□□□□□ -0.72
RNF40-209ENST00000566703 ATP5G1P05496 136 aa10.54□□□□□ -0.72
RNF40-209ENST00000566703 OR4E1P0C645 316 aa10.54□□□□□ -0.72
RNF40-209ENST00000566703 METTL15P1P0C7V9 234 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms