RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 SMDT1Q9H4I9 107 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 TMEM167BQ9NRX6 74 aa13.63□□□□□ -0.23
HERC2-208ENST00000566635 F8P00451 2351 aa13.62□□□□□ -0.23
HERC2-208ENST00000566635 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
HERC2-208ENST00000566635 RNF152Q8N8N0 203 aa13.62□□□□□ -0.23
HERC2-208ENST00000566635 RABAC1Q9UI14 185 aa13.62□□□□□ -0.23
HERC2-208ENST00000566635 C11orf94C9JXX5 98 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 SMIM6P0DI80 62 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 GUCA2BQ16661 112 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 OR4F5Q8NH21 305 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 CLPSL1A2RUU4 121 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 ZNF207O43670 478 aaKnown RBP13.61□□□□□ -0.23
HERC2-208ENST00000566635 RPL15P61313 204 aaKnown RBP13.61□□□□□ -0.23
HERC2-208ENST00000566635 HIST2H2BDQ6DRA6 164 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 TMEM88Q6PEY1 159 aa13.61□□□□□ -0.23
HERC2-208ENST00000566635 H3BTX0 84 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 FOLR2P14207 255 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 UNQ9165/PRO28630Q6UXU0 137 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 JMJD8Q96S16 334 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 SEC11CQ9BY50 192 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
HERC2-208ENST00000566635 CRLF1O75462 422 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 S100A8P05109 93 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 TAGLN2P37802 199 aaKnown RBP13.6□□□□□ -0.23
HERC2-208ENST00000566635 TCTEX1D4Q5JR98 221 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 CBLN2Q8IUK8 224 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 BLNKQ8WV28 456 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 C20orf24Q9BUV8 137 aa13.6□□□□□ -0.23
HERC2-208ENST00000566635 C18orf65Q6ZTR6 163 aa13.59□□□□□ -0.23
HERC2-208ENST00000566635 STXBP6Q8NFX7 210 aa13.59□□□□□ -0.23
HERC2-208ENST00000566635 LINC00587B1AMM8 73 aa13.58□□□□□ -0.23
HERC2-208ENST00000566635 LINC01006Q8NI28 216 aa13.58□□□□□ -0.23
HERC2-208ENST00000566635 IGHV3-49A0A0A0MS15 119 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 GGCTO75223 188 aaKnown RBP13.58□□□□□ -0.24
HERC2-208ENST00000566635 APOHP02749 345 aaPredicted RBP13.58□□□□□ -0.24
HERC2-208ENST00000566635 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
HERC2-208ENST00000566635 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 FAM90A2PQ658T7 463 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
HERC2-208ENST00000566635 UBE2E2Q96LR5 201 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 TMEM14CQ9P0S9 112 aa13.58□□□□□ -0.24
HERC2-208ENST00000566635 IGHV3OR16-13A0A075B7E8 117 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 IGHV3-74A0A0B4J1X5 117 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 IGHV3-66A0A0C4DH42 116 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 H3BQ15 152 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 NDUFA4O00483 81 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 MRPS12O15235 138 aaKnown RBP13.57□□□□□ -0.24
HERC2-208ENST00000566635 TCF21O43680 179 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 SOHLH1Q5JUK2 328 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 BPIFA4PQ86YQ2 179 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 ZNF586Q9NXT0 402 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 ARL2-SNX15V9GYD0 113 aa13.57□□□□□ -0.24
HERC2-208ENST00000566635 SCO2A0A1W2PP80 73 aa13.56□□□□□ -0.24
HERC2-208ENST00000566635 NBEAP1P0C6P0 100 aa13.56□□□□□ -0.24
HERC2-208ENST00000566635 NPPCP23582 126 aa13.56□□□□□ -0.24
HERC2-208ENST00000566635 KHDC1LQ5JSQ8 128 aa13.56□□□□□ -0.24
HERC2-208ENST00000566635 S100A7AQ86SG5 101 aa13.56□□□□□ -0.24
HERC2-208ENST00000566635 METTL26Q96S19 204 aa13.56□□□□□ -0.24
HERC2-208ENST00000566635 IGHV4OR15-8A0A075B7B6 117 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 A0A087WW49 117 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 IGLC2P0DOY2 106 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 TMEM190Q8WZ59 177 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
HERC2-208ENST00000566635 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 TMEM250H0YL14 139 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 RANP62826 216 aaKnown RBP13.55□□□□□ -0.24
HERC2-208ENST00000566635 DEFB136Q30KP8 78 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 C11orf44Q8N8P7 122 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 C17orf77Q96MU5 243 aa13.55□□□□□ -0.24
HERC2-208ENST00000566635 SETD2Q9BYW2 2564 aaPredicted RBP13.55□□□□□ -0.24
HERC2-208ENST00000566635 ZNF320A2RRD8 509 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 BUB3O43684 328 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 PDE6DO43924 150 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 HIST1H1EP10412 219 aaKnown RBP13.54□□□□□ -0.24
HERC2-208ENST00000566635 CRYBB3P26998 211 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 OR4F17Q8NGA8 305 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 TXNDC17Q9BRA2 123 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 HAX1O00165 279 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 UBE2CO00762 179 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 NDUFA7O95182 113 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 SUMO1P63165 101 aaKnown RBP13.54□□□□□ -0.24
HERC2-208ENST00000566635 ZNF674Q2M3X9 581 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 OR8I2Q8N0Y5 310 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 DERL1Q9BUN8 251 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 PARLQ9H300 379 aa13.54□□□□□ -0.24
HERC2-208ENST00000566635 C5orf52A6NGY3 159 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 COLCA2A8K830 154 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 F6UZH7 168 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 SLC17A3O00476 420 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 CD28P10747 220 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 RAB5BP61020 215 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 RPEL1Q2QD12 228 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 ELOVL1Q9BW60 279 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 U3KQE9 123 aa13.53□□□□□ -0.24
HERC2-208ENST00000566635 NDUFB4O95168 129 aa13.52□□□□□ -0.24
HERC2-208ENST00000566635 RPL7P18124 248 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms