RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SPTA1P02549 2419 aa11.33□□□□□ -0.6
CDH1-209ENST00000566510 NBASA2RRP1 2371 aa11.33□□□□□ -0.6
CDH1-209ENST00000566510 C20orf202A1L168 122 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 C17orf77Q96MU5 243 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 TLN1Q9Y490 2541 aaKnown RBP11.32□□□□□ -0.6
CDH1-209ENST00000566510 CT83Q5H943 113 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 NGBQ9NPG2 151 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 S4R3C0 116 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 hDV102S1A0JD36 115 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 CRYGBP07316 175 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 HTR1DP28221 377 aa11.32□□□□□ -0.6
CDH1-209ENST00000566510 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
CDH1-209ENST00000566510 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
CDH1-209ENST00000566510 SYS1-DBNDD2H3BUS1 97 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 SOX21Q9Y651 276 aaPredicted RBP11.31□□□□□ -0.6
CDH1-209ENST00000566510 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.31□□□□□ -0.6
CDH1-209ENST00000566510 PPIAL4CA0A0B4J2A2 164 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 PLP1P60201 277 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 PRR30Q53SZ7 412 aaPredicted RBP11.31□□□□□ -0.6
CDH1-209ENST00000566510 IGFBPL1Q8WX77 278 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
CDH1-209ENST00000566510 RBM14Q96PK6 669 aaKnown RBP11.31□□□□□ -0.6
CDH1-209ENST00000566510 GFRA4Q9GZZ7 299 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 ONECUT1Q9UBC0 465 aa11.31□□□□□ -0.6
CDH1-209ENST00000566510 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
CDH1-209ENST00000566510 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
CDH1-209ENST00000566510 PVRIGQ6DKI7 326 aa11.3□□□□□ -0.6
CDH1-209ENST00000566510 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
CDH1-209ENST00000566510 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
CDH1-209ENST00000566510 PMCHL2Q9BQD1 86 aa11.3□□□□□ -0.6
CDH1-209ENST00000566510 I3L2K1 104 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 BPIFA4PQ86YQ2 179 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 WNK2Q9Y3S1 2297 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 SVEP1Q4LDE5 3571 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 IGKV1-17P01599 117 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 KLF17Q5JT82 389 aaPredicted RBP11.29□□□□□ -0.6
CDH1-209ENST00000566510 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
CDH1-209ENST00000566510 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 IL4P05112 153 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
CDH1-209ENST00000566510 RBPJQ06330 500 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 TMUB1Q9BVT8 246 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 SCNM1Q9BWG6 230 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 ANKHD1Q8IWZ3 2542 aaKnown RBP11.28□□□□□ -0.6
CDH1-209ENST00000566510 A0A1B0GUT8 65 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.28□□□□□ -0.6
CDH1-209ENST00000566510 TIMM23O14925 209 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 CCL25O15444 150 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 CD3EP07766 207 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 ERASQ7Z444 233 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 Q8NA96 180 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 ZNF738Q8NE65 137 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
CDH1-209ENST00000566510 NPIPB6E9PJ23 425 aa11.27□□□□□ -0.6
CDH1-209ENST00000566510 LIPFP07098 398 aa11.27□□□□□ -0.6
CDH1-209ENST00000566510 ORAOV1Q8WV07 137 aa11.27□□□□□ -0.6
CDH1-209ENST00000566510 TMEM191AQ9H0A3 160 aa11.27□□□□□ -0.6
CDH1-209ENST00000566510 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 FAM231BA6NCW3 169 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 B9A039 149 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 K7EQM0 130 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 M0R3E3 92 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 HAX1O00165 279 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 MPV17L2Q567V2 206 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 MUC15Q8N387 334 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 COX11Q9Y6N1 276 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
CDH1-209ENST00000566510 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 CRXO43186 299 aaPredicted RBP11.26□□□□□ -0.61
CDH1-209ENST00000566510 HES1Q14469 280 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 LY6HO94772 140 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
CDH1-209ENST00000566510 OR5AL1P0C617 328 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
CDH1-209ENST00000566510 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 K7EIM0 57 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 HLA-DRB1P01911 266 aa11.25□□□□□ -0.61
CDH1-209ENST00000566510 ARF6P62330 175 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms